Non-Coding RNA Search

Tes1-TES01G100066

Sequence:


               
               GGTGGCGCGGCGGAGGCGGCCGCGCCTGGCGGGAAGCGCTGGGCCGTTCTGGGCGCCCGC
CGCTCGCCTCCGCCTCCGCGCGCCCGGGGGCCCCGGCGCCCCCCGAGCGAGGGCGGCCAG
CCCGCTGCTCGCCGTGTGACAGATGCTCATCGCCATGGAGTTGCCGCAGCGGCACCTTCG
GGGGCTCGGGCGAGCTACGGGAGCCGGGATCTGAGCGAGCGCTGGGGCCAGCGGAGCCGG
AGCCGCCGGGACGCGGATCTGATCTCTTCTGAACAACCTCACCGTGTCTCCATCCCTGGA
ACTCTGAACCCAGCAGCTGGACCACTTTGTCCTTGAAATTTTGGGTTCCCTTTCTTCTCC
ATTTTCCTTTTATCCCTTACCCCTCCTGAGAACTCCTGGAGACTGTAGGATTGTCATGGA
GTCCAGGGAAATCTTAAGCAGCTCCCGGCAAAGGGGAAGTGAGTCGGAATTCTTGCCGGT
CTCCTCAGCCAAGGCGCCGACTGCTCCCGGCTGTGCAGGGGAACCTTTGCTCTCTGCTCC
TGAGACTGGGAAGGGGATACCAGTAGGTGGAGAACGTATGGAGCCAGAGGAGGAGGATGA
ACTGGGCTCAGGACGGGATGTGGACTCCAACTCCAATGCAGACAGTGAGAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTGGCGCGGCGGAGGCGGCCGCGCCTGGCGGGAAGCGCTGGGCCGTTCTGGGCGCCCGC
CGCTCGCCTCCGCCTCCGCGCGCCCGGGGGCCCCGGCGCCCCCCGAGCGAGGGCGGCCAG
CCCGCTGCTCGCCGTGTGACAGATGCTCATCGCCATGGAGTTGCCGCAGCGGCACCTTCG
GGGGCTCGGGCGAGCTACGGGAGCCGGGATCTGAGCGAGCGCTGGGGCCAGCGGAGCCGG
AGCCGCCGGGACGCGGATCTGATCTCTTCTGAACAACCTCACCGTGTCTCCATCCCTGGA
ACTCTGAACCCAGCAGCTGGACCACTTTGTCCTTGAAATTTTGGGTTCCCTTTCTTCTCC
ATTTTCCTTTTATCCCTTACCCCTCCTGAGAACTCCTGGAGACTGTAGGATTGTCATGGA
GTCCAGGGAAATCTTAAGCAGCTCCCGGCAAAGGGGAAGTGAGTCGGAATTCTTGCCGGT
CTCCTCAGCCAAGGCGCCGACTGCTCCCGGCTGTGCAGGGGAACCTTTGCTCTCTGCTCC
TGAGACTGGGAAGGGGATACCAGTAGGTGGAGAACGTATGGAGCCAGAGGAGGAGGATGA
ACTGGGCTCAGGACGGGATGTGGACTCCAACTCCAATGCAGACAGTGAGAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               484-603, - strand, RNAz p=0.830662

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               484-603, - strand, RNAz p=0.830662

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               253-652, gnl|bosTau2|chr24 (32784278-32783882)
               

               
               253-652, gnl|Hg17|chr18 (40535140-40535546)
               

               
               253-652, gnl|Mm7|chr18 (79372661-79372277)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               253-652, gnl|bosTau2|chr24 (32784278-32783882)
               

               
               253-652, gnl|Hg17|chr18 (40535140-40535546)
               

               
               253-652, gnl|Mm7|chr18 (79372661-79372277)

	253-652, gnl\|bosTau2\|chr24 (32784278-32783882)
	253-652, gnl\|Hg17\|chr18 (40535140-40535546)
	253-652, gnl\|Mm7\|chr18 (79372661-79372277)