Non-Coding RNA Search

Tes1-TES01G120033

Sequence:


               
               GGCCTTGTTGACTACTAGTAGGATTTGTGTGCCTGGCCCCATTTTTGGTGCTGGGGGTGC
CCCCTTAAACCTGGGGCCCTCAGTTTAAAATCCACTAATTCATTTAAAAATGGTTCTCTG
GTGTCTGGCCTTTCCAGTCCATCCTTGCTGGAATTTGTGAGACAAAAGGATGGAACAGGT
CCCTAGGCAGAGAGCGAGGTAGGACCAATACTTAGAAAGTGGGGCTGGACTAAGGGTCAT
CCCTCTGGTGTGAAGGGCGTGACTGCCCATCCACATTAGGCCTGGCCTAGGTGCTGGGCT
TAGGATGCTTTCTGCTTGTGCTCCCTGGATTCAGGCTGGTGCGGATTCCAAGAACTTCTT
TAACCATTAAATGTTAGGTACTTGCTCTGTTCCTCACTTACTGTGGACAGTGCTGAGGAC
ACAGCATGACCAAGGCCATCCTGGACCCTGCCCTGATGGGGCTCCCAATCCAAAGGCAAA
AATGGGGTGTGGTATGGTGAGAGTGAGGGCTTCCTGAAGAAGGAAACATGTTACTACAAT
AGAAGTGAGCTGGGATAAAAGACTGATTGCATCCCCACAACCTATCCTTCCTCAGCAACT
TGAGTCATTTCTTCATCTCCTATGGACATGCTGTGCTCCTGGCCCCTTGTGACGGACAGT
GCTGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCCTTGTTGACTACTAGTAGGATTTGTGTGCCTGGCCCCATTTTTGGTGCTGGGGGTGC
CCCCTTAAACCTGGGGCCCTCAGTTTAAAATCCACTAATTCATTTAAAAATGGTTCTCTG
GTGTCTGGCCTTTCCAGTCCATCCTTGCTGGAATTTGTGAGACAAAAGGATGGAACAGGT
CCCTAGGCAGAGAGCGAGGTAGGACCAATACTTAGAAAGTGGGGCTGGACTAAGGGTCAT
CCCTCTGGTGTGAAGGGCGTGACTGCCCATCCACATTAGGCCTGGCCTAGGTGCTGGGCT
TAGGATGCTTTCTGCTTGTGCTCCCTGGATTCAGGCTGGTGCGGATTCCAAGAACTTCTT
TAACCATTAAATGTTAGGTACTTGCTCTGTTCCTCACTTACTGTGGACAGTGCTGAGGAC
ACAGCATGACCAAGGCCATCCTGGACCCTGCCCTGATGGGGCTCCCAATCCAAAGGCAAA
AATGGGGTGTGGTATGGTGAGAGTGAGGGCTTCCTGAAGAAGGAAACATGTTACTACAAT
AGAAGTGAGCTGGGATAAAAGACTGATTGCATCCCCACAACCTATCCTTCCTCAGCAACT
TGAGTCATTTCTTCATCTCCTATGGACATGCTGTGCTCCTGGCCCCTTGTGACGGACAGT
GCTGGGG

Predicted RNA structure(s): 2 entry(ies)

More info

Predicted RNA structure(s): 2 entry(ies)

Help | Less info


               
               14-311, - strand, RNAz p=0.748238
               

               
               352-503, + strand, RNAz p=0.962474

Predicted RNA structure(s): 2 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               14-311, - strand, RNAz p=0.748238
               

               
               352-503, + strand, RNAz p=0.962474

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               14-503, gnl|bosTau2|chr18 (45789813-45790310)
               

               
               14-503, gnl|Hg17|chr19 (46505590-46506002)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-503, gnl|bosTau2|chr18 (45789813-45790310)
               

               
               14-503, gnl|Hg17|chr19 (46505590-46506002)

	14-311, - strand, RNAz p=0.748238
	352-503, + strand, RNAz p=0.962474

	14-503, gnl\|bosTau2\|chr18 (45789813-45790310)
	14-503, gnl\|Hg17\|chr19 (46505590-46506002)