Non-Coding RNA Search

Tes1-TES01H020026

Sequence:


               
               ATTCTGTGCTTATGCAGGAGAGACCTAGTTTAACAGAAATCATGTAATGGTCAGGACCAA
ATTTAATGAAAATTTAGCATATTACCCAGAGTGCTAATACAGTGTTTTCTCTGGACACCT
CTGATGCCTTCCTTAGAAGAGTTTTGTTATTGTGTTGGTGAGGAACACAGAAATGATTGG
GGGCATTTTGTCAGCCTAATAGCACTATAGCAAGAATCAAGAGACCTTGTTACCAGGTCT
AGTTTTGCCATTAGCCTGATCTAAATTTAGTTTGGTCTCTTAATAGCCCTGTACCCCAGT
TTATATGTCTGCAATTTAAATGAAGAGTTTGAGGTAGACATATTTAGTTTGTCTGTTTTT
TCTGCTTTTTAGGGCTACACCCTCAGCACaggttcccaggctaggggtccaatctgagct
acagctgctggcctacaccacaggcacagcaacatcagattggagctgcgtctgtgacct
acaccacagctcacagcaatgctggatccttaacctactgagcgaggccagggatcgaac
cctcagcctcatggttcccagtcagacttgtttccactgcaccatgacgggaactcTGAG
ATAGAGGATCTTGAAAACCCTTTTTCACTCAGGGATCCTAATCTTTAGTCCTTACATTCT
TTGAAATGTGACAGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTCTGTGCTTATGCAGGAGAGACCTAGTTTAACAGAAATCATGTAATGGTCAGGACCAA
ATTTAATGAAAATTTAGCATATTACCCAGAGTGCTAATACAGTGTTTTCTCTGGACACCT
CTGATGCCTTCCTTAGAAGAGTTTTGTTATTGTGTTGGTGAGGAACACAGAAATGATTGG
GGGCATTTTGTCAGCCTAATAGCACTATAGCAAGAATCAAGAGACCTTGTTACCAGGTCT
AGTTTTGCCATTAGCCTGATCTAAATTTAGTTTGGTCTCTTAATAGCCCTGTACCCCAGT
TTATATGTCTGCAATTTAAATGAAGAGTTTGAGGTAGACATATTTAGTTTGTCTGTTTTT
TCTGCTTTTTAGGGCTACACCCTCAGCACaggttcccaggctaggggtccaatctgagct
acagctgctggcctacaccacaggcacagcaacatcagattggagctgcgtctgtgacct
acaccacagctcacagcaatgctggatccttaacctactgagcgaggccagggatcgaac
cctcagcctcatggttcccagtcagacttgtttccactgcaccatgacgggaactcTGAG
ATAGAGGATCTTGAAAACCCTTTTTCACTCAGGGATCCTAATCTTTAGTCCTTACATTCT
TTGAAATGTGACAGG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               80-317, - strand, RNAz p=0.993053

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               80-317, - strand, RNAz p=0.993053

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

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               1-338, gnl|bosTau2|chr16 (14835213-14835539)
               

               
               1-338, gnl|canFam2|chr1 (83771196-83770618)
               

               
               1-338, gnl|dasNov1|scaffold_1523 (25967-26566)
               

               
               1-338, gnl|hg17|chr9 (77798967-77799534)
               

               
               1-338, gnl|Hg17|chr9 (77799478-77799154)
               

               
               1-338, gnl|loxAfr1|scaffold_3311 (93871-94451)
               

               
               1-338, gnl|mm7|chr19 (15895358-15894967)
               

               
               1-338, gnl|oryCun1|scaffold_213664 (302078-302694)
               

               
               1-338, gnl|panTro1|chr11 (61682502-61683074)
               

               
               1-338, gnl|rheMac2|chr15 (86661513-86662079)
               

               
               1-338, gnl|rn3|chr1 (219742888-219742427)

Aligned organism(s): 11 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-338, gnl|bosTau2|chr16 (14835213-14835539)
               

               
               1-338, gnl|canFam2|chr1 (83771196-83770618)
               

               
               1-338, gnl|dasNov1|scaffold_1523 (25967-26566)
               

               
               1-338, gnl|hg17|chr9 (77798967-77799534)
               

               
               1-338, gnl|Hg17|chr9 (77799478-77799154)
               

               
               1-338, gnl|loxAfr1|scaffold_3311 (93871-94451)
               

               
               1-338, gnl|mm7|chr19 (15895358-15894967)
               

               
               1-338, gnl|oryCun1|scaffold_213664 (302078-302694)
               

               
               1-338, gnl|panTro1|chr11 (61682502-61683074)
               

               
               1-338, gnl|rheMac2|chr15 (86661513-86662079)
               

               
               1-338, gnl|rn3|chr1 (219742888-219742427)

	1-338, gnl\|bosTau2\|chr16 (14835213-14835539)
	1-338, gnl\|canFam2\|chr1 (83771196-83770618)
	1-338, gnl\|dasNov1\|scaffold_1523 (25967-26566)
	1-338, gnl\|hg17\|chr9 (77798967-77799534)
	1-338, gnl\|Hg17\|chr9 (77799478-77799154)
	1-338, gnl\|loxAfr1\|scaffold_3311 (93871-94451)
	1-338, gnl\|mm7\|chr19 (15895358-15894967)
	1-338, gnl\|oryCun1\|scaffold_213664 (302078-302694)
	1-338, gnl\|panTro1\|chr11 (61682502-61683074)
	1-338, gnl\|rheMac2\|chr15 (86661513-86662079)
	1-338, gnl\|rn3\|chr1 (219742888-219742427)