Non-Coding RNA Search

Thy1-THY010001C05

Sequence:


               
               ATTGCAAATGTGATTGCTGGATGCCCTTGTAGTAGCAAAAGGGGTGTGTGCTGGAAGAGT
TAGTTTTCATGCCTCCTCCCCTTGGCCCCCACGCGTGCGCGTGCGCACTCTCACACACAC
ACACACACACACACACTCACACACACATCGTTTCATCCTTGGCACTCTAAACTCTCTTTA
ATCTTTTGCTTCTGAATCTCACTTCTCAGCCAAAAAATTATTGAAATATTAGTTGTTTTG
CCCAAATTGATGTTAGAGGTCACATGGGCAGGAAGAGTTAGTGTACACTGCCTGGCTATT
ACATTTAGAACCTGTGATGACATCATCCAAGGCCGACCCAGAAATGCTTATTTTCTTGTC
TTATTTTTGAAACCTGATTTCCACTTTTATTTCTCAAGTGTTTTAAAAACTTCAATTATC
TTTGGGATTGATAATGGATTCTAATTTTTAAAAACCCAAATATAAGGAAAATGGAAATTA
AAGCACCTGCATTTTGCTATACCTGCTGCTGCTTAAAAGCAAGCAATTTAATTTAGACTG
TTTTTAATAAGCCTGCTTTAAGTTCCTTTGTATAGAAGTTTCTTGTATTCTCTTCAATGA
GCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTGCAAATGTGATTGCTGGATGCCCTTGTAGTAGCAAAAGGGGTGTGTGCTGGAAGAGT
TAGTTTTCATGCCTCCTCCCCTTGGCCCCCACGCGTGCGCGTGCGCACTCTCACACACAC
ACACACACACACACACTCACACACACATCGTTTCATCCTTGGCACTCTAAACTCTCTTTA
ATCTTTTGCTTCTGAATCTCACTTCTCAGCCAAAAAATTATTGAAATATTAGTTGTTTTG
CCCAAATTGATGTTAGAGGTCACATGGGCAGGAAGAGTTAGTGTACACTGCCTGGCTATT
ACATTTAGAACCTGTGATGACATCATCCAAGGCCGACCCAGAAATGCTTATTTTCTTGTC
TTATTTTTGAAACCTGATTTCCACTTTTATTTCTCAAGTGTTTTAAAAACTTCAATTATC
TTTGGGATTGATAATGGATTCTAATTTTTAAAAACCCAAATATAAGGAAAATGGAAATTA
AAGCACCTGCATTTTGCTATACCTGCTGCTGCTTAAAAGCAAGCAATTTAATTTAGACTG
TTTTTAATAAGCCTGCTTTAAGTTCCTTTGTATAGAAGTTTCTTGTATTCTCTTCAATGA
GCAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               1-147, - strand, RNAz p=0.996006

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-147, - strand, RNAz p=0.996006

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-147, gnl|bosTau2|chr17 (32079459-32079606)
               

               
               1-147, gnl|Hg17|chr12 (117089584-117089449)
               

               
               1-147, gnl|Mm7|chr5 (116471702-116471831)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-147, gnl|bosTau2|chr17 (32079459-32079606)
               

               
               1-147, gnl|Hg17|chr12 (117089584-117089449)
               

               
               1-147, gnl|Mm7|chr5 (116471702-116471831)

	1-147, gnl\|bosTau2\|chr17 (32079459-32079606)
	1-147, gnl\|Hg17\|chr12 (117089584-117089449)
	1-147, gnl\|Mm7\|chr5 (116471702-116471831)