Non-Coding RNA Search

Thy1-THY010006G09

Sequence:


               
               TAATCGAAGGCAACGAGGAGATTTGTTTAAAGAAGCGATGCTGAGAATGATTTTTATAAA
TATTTAAGATAATCTAAAACCATTAGAGGAATTGCAGGGTTTATTAAAAAAACTGAAAGC
GTGTTTTGGAAGGGTTCCTTTTCTTTCCAAGCTTGAATAAATGTCAAGAGTAGGAAATCA
GGGAAGAGCATTTTTCTGAGCAGGGACACAGGGCCTGGAAGGGGCAGGTGGGCCTCTGGT
CTGTTTGTCTTTGCTGTTGGGTGTTGGCAGCTGTGCAGCCATCCGTTTATGGGGGCTGAT
GGGTGGGGAGCCCAAGGGCAGCCAACTCCCCAGAACTGAGGGGATTGCCTCACAGTTCTG
AAGCTGCCTGAGCTTCCCTGAGACTCGGGGCCAGTGGCACATGCCAGGAATCACCCTGGG
GGCTGAACATTTCATCTCACAGCTTGCTTGTGAGAGTCAGTGGCAGGCTTCTGGAAGGTT
CCTAAGGTGGAGGTCTTTTGGTTCATGACAGGCTACATTTTCCTGAGCCCTGCTAAGGCC
TGCAGGTTGGGAGGCATCTAGGTGTCAAAGTGAAGAATGTGTGGTAGGGGGCACATCAGA
GCTGGGGGGCATCTTGGAACACCTCCCAGTTGGAAGTGTGCCCCAAATCCCTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAATCGAAGGCAACGAGGAGATTTGTTTAAAGAAGCGATGCTGAGAATGATTTTTATAAA
TATTTAAGATAATCTAAAACCATTAGAGGAATTGCAGGGTTTATTAAAAAAACTGAAAGC
GTGTTTTGGAAGGGTTCCTTTTCTTTCCAAGCTTGAATAAATGTCAAGAGTAGGAAATCA
GGGAAGAGCATTTTTCTGAGCAGGGACACAGGGCCTGGAAGGGGCAGGTGGGCCTCTGGT
CTGTTTGTCTTTGCTGTTGGGTGTTGGCAGCTGTGCAGCCATCCGTTTATGGGGGCTGAT
GGGTGGGGAGCCCAAGGGCAGCCAACTCCCCAGAACTGAGGGGATTGCCTCACAGTTCTG
AAGCTGCCTGAGCTTCCCTGAGACTCGGGGCCAGTGGCACATGCCAGGAATCACCCTGGG
GGCTGAACATTTCATCTCACAGCTTGCTTGTGAGAGTCAGTGGCAGGCTTCTGGAAGGTT
CCTAAGGTGGAGGTCTTTTGGTTCATGACAGGCTACATTTTCCTGAGCCCTGCTAAGGCC
TGCAGGTTGGGAGGCATCTAGGTGTCAAAGTGAAGAATGTGTGGTAGGGGGCACATCAGA
GCTGGGGGGCATCTTGGAACACCTCCCAGTTGGAAGTGTGCCCCAAATCCCTCA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               150-304, + strand, RNAz p=0.771951

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               150-304, + strand, RNAz p=0.771951

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-479, gnl|bosTau2|chr23 (7012395-7012879)
               

               
               1-479, gnl|Mm7|chr15 (64132204-64131675)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-479, gnl|bosTau2|chr23 (7012395-7012879)
               

               
               1-479, gnl|Mm7|chr15 (64132204-64131675)

	1-479, gnl\|bosTau2\|chr23 (7012395-7012879)
	1-479, gnl\|Mm7\|chr15 (64132204-64131675)