Non-Coding RNA Search

Thy1-THY010008C02

Sequence:


               
               TTAACTGTAGTTTTCCTTATTTCAACAATAGTAAGAGAAAGTGCATTTTTACTATAAGTC
TGAAATGTATTCTTTATATCTGGTAAAAACCAAAAACTATAAAAATGTTTTTACCCAGAT
AACCCTAATGGCTCCTTCAAAAGAAAAATGCATGTACAGTTCTTTCTCCCAAGTTGCTTT
CTGCAATGTAGGTTAATGTGACCTGACAGGTTGTAATAATTACTAAAGAGCATTTCCATT
AATTATAATGGATAACCCAATAATATGGATCTTTATGCTGTTAGTGTGAATAGATCAAGC
CAGAACCATACTTGTAGCTGGAGTGCAATTGAATTGCAAAAGTCCAAATCTTACAGAATG
AAAACACATGATGAAAATTTCACCAGGTCATTCAGTGATGCCAGTGGTATCACCACTCTT
TCATTCATTAGCCTTAAGTATTTTTCAAAAGTAAATATACTGTCTTGGGAAAGAGGAAGT
AAGAAAGTTGAAGAACAAGAGTGAGTGAGAGGAGGTACTTCTGTGACTTTTGAGTGTTTT
TTACTTTAAAAAACAACCCTCTTTTTGTAAGGAAAAGTCCTTCTGAAAGTGTCCCCAGCA
AGCTGAGTGTCAGTGCGATGAAATTCCAGGGGCTTGGGAACCCTCTGTTCCTCCTAGGCT
CTGCTCTCAGTCCCTTGAGAAAAAAAGCCAATTTTCCCTATGACTTCAGTCTTCTTATAT
ATAAAAAGCAGAAAAATCAGCAGTCGATTTCCTCACAGGAGTGTCGTTCAGTGACTGCAC
AGCGATTGAAAAGCATTTTCGCTATCTTAAAAATGTGTTCATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTAACTGTAGTTTTCCTTATTTCAACAATAGTAAGAGAAAGTGCATTTTTACTATAAGTC
TGAAATGTATTCTTTATATCTGGTAAAAACCAAAAACTATAAAAATGTTTTTACCCAGAT
AACCCTAATGGCTCCTTCAAAAGAAAAATGCATGTACAGTTCTTTCTCCCAAGTTGCTTT
CTGCAATGTAGGTTAATGTGACCTGACAGGTTGTAATAATTACTAAAGAGCATTTCCATT
AATTATAATGGATAACCCAATAATATGGATCTTTATGCTGTTAGTGTGAATAGATCAAGC
CAGAACCATACTTGTAGCTGGAGTGCAATTGAATTGCAAAAGTCCAAATCTTACAGAATG
AAAACACATGATGAAAATTTCACCAGGTCATTCAGTGATGCCAGTGGTATCACCACTCTT
TCATTCATTAGCCTTAAGTATTTTTCAAAAGTAAATATACTGTCTTGGGAAAGAGGAAGT
AAGAAAGTTGAAGAACAAGAGTGAGTGAGAGGAGGTACTTCTGTGACTTTTGAGTGTTTT
TTACTTTAAAAAACAACCCTCTTTTTGTAAGGAAAAGTCCTTCTGAAAGTGTCCCCAGCA
AGCTGAGTGTCAGTGCGATGAAATTCCAGGGGCTTGGGAACCCTCTGTTCCTCCTAGGCT
CTGCTCTCAGTCCCTTGAGAAAAAAAGCCAATTTTCCCTATGACTTCAGTCTTCTTATAT
ATAAAAAGCAGAAAAATCAGCAGTCGATTTCCTCACAGGAGTGTCGTTCAGTGACTGCAC
AGCGATTGAAAAGCATTTTCGCTATCTTAAAAATGTGTTCATA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               347-459, - strand, RNAz p=0.960444

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               347-459, - strand, RNAz p=0.960444

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               85-724, gnl|bosTau2|chr14 (33542503-33543142)
               

               
               85-724, gnl|Hg17|chr12 (43992716-43993396)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               85-724, gnl|bosTau2|chr14 (33542503-33543142)
               

               
               85-724, gnl|Hg17|chr12 (43992716-43993396)

	85-724, gnl\|bosTau2\|chr14 (33542503-33543142)
	85-724, gnl\|Hg17\|chr12 (43992716-43993396)