Non-Coding RNA Search

Thy1-THY010009G01

Sequence:


               
               ATTTCTCCCTTCCACTGACAAGGACCCTCTCCTTGACCAAACTTTAGTCAGGGGCCCTCT
TCTCAACTTGGCCCCATCTTGGGCCTGACAAACTCAGTTAAGCTAGAATACCCTGACTCT
TTGATACCTAGCCAAGTCCCTCTTAGCAGTTTTCCATCCACTGATTCCCTCACCTGCCCA
CTCACTATAACCCCTAGCTGCCTCAGTTGTATCTGGAGATGAGTTCAGTCTCTCTCCTGT
TGCAGTAGTCTTGAATAAAGTCTAGCCTGTTGAACTCCCTCCGGTGTATTTTCCCTTTGC
GCATATACGTGCATCCATGCAAACTCTTAACAAAGTCTCTGATTCTGTTGTCTTATTCTC
TCTCTTGAGCTCAGAAAAGATTCTGGGAACGGATATTCAGGTCCAGTGAGAAGAAAGCCA
TCTGTCACACCTGGCCATGGGGTCCCTCTCAGGGAAGAGATGATCTCTGTCACCAGGGCC
TGCGAGTGACAGCAGAGTCATGATCAGCTCTATGCCCTGGAGCTTCTGGAAAGAACCACT
ATGGGGGGCCGAGGGGGGGGTAGCTGTCAGGGTGCCCAGGAGTATCCCCTTCTAGGCTTT
TCCTGTTCTCATCGCTTGAAAAGAACTGTTCTAACCTTGGTTCCTGCAGAAGCATTTTGT
CATTAGAGGCGTTTCTCGGCATATCTATTTTGGAGCTGCAGCTGGTTGCTTCTCAGAATA
AACAGAGCTGTGATATTGGGATAAAAGAAGAAAGGAGTATCATCTCCTCTTTATGCCCTC
CCTCCTCCCTATGTTTCCCAGCCTCCGTTTCCCTCTTTTTAAAGGCCTTCCCCTAAAACC
CCTCTACCTCACCCCCTGACCCATGGCTTTCCCTTCACCATCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTCTCCCTTCCACTGACAAGGACCCTCTCCTTGACCAAACTTTAGTCAGGGGCCCTCT
TCTCAACTTGGCCCCATCTTGGGCCTGACAAACTCAGTTAAGCTAGAATACCCTGACTCT
TTGATACCTAGCCAAGTCCCTCTTAGCAGTTTTCCATCCACTGATTCCCTCACCTGCCCA
CTCACTATAACCCCTAGCTGCCTCAGTTGTATCTGGAGATGAGTTCAGTCTCTCTCCTGT
TGCAGTAGTCTTGAATAAAGTCTAGCCTGTTGAACTCCCTCCGGTGTATTTTCCCTTTGC
GCATATACGTGCATCCATGCAAACTCTTAACAAAGTCTCTGATTCTGTTGTCTTATTCTC
TCTCTTGAGCTCAGAAAAGATTCTGGGAACGGATATTCAGGTCCAGTGAGAAGAAAGCCA
TCTGTCACACCTGGCCATGGGGTCCCTCTCAGGGAAGAGATGATCTCTGTCACCAGGGCC
TGCGAGTGACAGCAGAGTCATGATCAGCTCTATGCCCTGGAGCTTCTGGAAAGAACCACT
ATGGGGGGCCGAGGGGGGGGTAGCTGTCAGGGTGCCCAGGAGTATCCCCTTCTAGGCTTT
TCCTGTTCTCATCGCTTGAAAAGAACTGTTCTAACCTTGGTTCCTGCAGAAGCATTTTGT
CATTAGAGGCGTTTCTCGGCATATCTATTTTGGAGCTGCAGCTGGTTGCTTCTCAGAATA
AACAGAGCTGTGATATTGGGATAAAAGAAGAAAGGAGTATCATCTCCTCTTTATGCCCTC
CCTCCTCCCTATGTTTCCCAGCCTCCGTTTCCCTCTTTTTAAAGGCCTTCCCCTAAAACC
CCTCTACCTCACCCCCTGACCCATGGCTTTCCCTTCACCATCTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               6-170, - strand, RNAz p=0.999826

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               6-170, - strand, RNAz p=0.999826

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               6-884, gnl|bosTau2|chr8 (40055762-40054886)
               

               
               6-884, gnl|Hg17|chr8 (27281679-27282681)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-884, gnl|bosTau2|chr8 (40055762-40054886)
               

               
               6-884, gnl|Hg17|chr8 (27281679-27282681)

	6-884, gnl\|bosTau2\|chr8 (40055762-40054886)
	6-884, gnl\|Hg17\|chr8 (27281679-27282681)