Thy1-THY010010A07
|
CTTGGAAACAATACCGCGAGGTGCTGAGTGGCCTCCTCCTGCGCCCGCCCGCCCGCTGCT
GCCGCCGCCCCTGTCCGCGCCTCTCGCCTCCCGCCACAACCCGTTTGGGCGCCAAGTCCC
CGAGTGCTCGTCACGCTGGACCCTGGCGCGGAGCCCTGGCATCACGACTCGGAGGCCGAG
ACTCTCTCCTGGAGTCACCCAGGACACACTCTTACCACATCGTGGAGCCTGTTTGTTGTG
TTGAGCAAGCAGGGGGCGGAGACTAGCGTCTCGGGCGGGGCTTAGCCCGTTTGGAGGGAA
CCTGGTCGCCCTGGGATTGCTGGCTTTTGTTTTTGCTTCCGAGCCTGGAGCTCAGCTCAG
ACTCAGAT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTTGGAAACAATACCGCGAGGTGCTGAGTGGCCTCCTCCTGCGCCCGCCCGCCCGCTGCT
GCCGCCGCCCCTGTCCGCGCCTCTCGCCTCCCGCCACAACCCGTTTGGGCGCCAAGTCCC
CGAGTGCTCGTCACGCTGGACCCTGGCGCGGAGCCCTGGCATCACGACTCGGAGGCCGAG
ACTCTCTCCTGGAGTCACCCAGGACACACTCTTACCACATCGTGGAGCCTGTTTGTTGTG
TTGAGCAAGCAGGGGGCGGAGACTAGCGTCTCGGGCGGGGCTTAGCCCGTTTGGAGGGAA
CCTGGTCGCCCTGGGATTGCTGGCTTTTGTTTTTGCTTCCGAGCCTGGAGCTCAGCTCAG
ACTCAGAT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
282-367, + strand, RNAmicro p=0.956807 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
282-367, + strand, RNAmicro p=0.956807 |
|
195-368, gnl|bosTau2|chr10 (23183932-23184105) |
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195-368, gnl|canFam2|chr30 (10308545-10308909) |
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195-368, gnl|dasNov1|scaffold_1055 (8798-8449) |
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195-368, gnl|echTel1|scaffold_164012 (8815-8479) |
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195-368, gnl|hg17|chr15 (38185896-38186246) |
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195-368, gnl|Hg17|chr15 (38186256-38186075) |
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195-368, gnl|loxAfr1|scaffold_28256 (6129-5763) |
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195-368, gnl|mm7|chr2 (118288189-118288527) |
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195-368, gnl|Mm7|chr2 (118288537-118288372) |
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195-368, gnl|monDom2|scaffold_12 (2552308-2551900) |
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195-368, gnl|oryCun1|scaffold_197265 (100785-100499) |
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195-368, gnl|panTro1|chr16 (38070640-38070990) |
|
195-368, gnl|rheMac2|chr7 (18450302-18450651) |
|
195-368, gnl|rn3|chr3 (104878844-104879163) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
195-368, gnl|bosTau2|chr10 (23183932-23184105) |
|
195-368, gnl|canFam2|chr30 (10308545-10308909) |
|
195-368, gnl|dasNov1|scaffold_1055 (8798-8449) |
|
195-368, gnl|echTel1|scaffold_164012 (8815-8479) |
|
195-368, gnl|hg17|chr15 (38185896-38186246) |
|
195-368, gnl|Hg17|chr15 (38186256-38186075) |
|
195-368, gnl|loxAfr1|scaffold_28256 (6129-5763) |
|
195-368, gnl|mm7|chr2 (118288189-118288527) |
|
195-368, gnl|Mm7|chr2 (118288537-118288372) |
|
195-368, gnl|monDom2|scaffold_12 (2552308-2551900) |
|
195-368, gnl|oryCun1|scaffold_197265 (100785-100499) |
|
195-368, gnl|panTro1|chr16 (38070640-38070990) |
|
195-368, gnl|rheMac2|chr7 (18450302-18450651) |
|
195-368, gnl|rn3|chr3 (104878844-104879163) |
