Non-Coding RNA Search

Thy1-THY010010E12

Sequence:


               
               AGCAGAGAAGGGAGGAGCATGTGGGCGGGTGCGTGTAAGAGCCCCCAAGGGGGCCTTTCT
ATCCTGCAACCGGGAGGGGACACGGGTGCTCCCTGCCGAGTTCCCTTCTGCTGGCAAATG
GCTCAGATGAGCCCAGGCAGCTTTGCCCCAGTGTATCCTACCAGCCTAGTTTTCTTTCGA
TGGCAGCGGAGACTGTCCTGGTTGATGTTCAAGGAATGTCCGGCCGGGGCACAGTGGACG
CTTTGTTCATTCCTGCAGCGTGGTTATTTCTGAGGTGCTGCCAAAGCGGACTCGCTGGGC
TCTGGGGACAGAAAGAAAAGGTTGTCTGTGTCCTGCACAAGGGATTTGGAAGGTGAGGGT
CTGCCGGATGGAGGGAGTTGATGCTGGCAAATCACACGTTTGGACTGTATTTATTCCTTC
TCTTCATTCACTCTCGAGGGCTTTTTGTTTTTGTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCAGAGAAGGGAGGAGCATGTGGGCGGGTGCGTGTAAGAGCCCCCAAGGGGGCCTTTCT
ATCCTGCAACCGGGAGGGGACACGGGTGCTCCCTGCCGAGTTCCCTTCTGCTGGCAAATG
GCTCAGATGAGCCCAGGCAGCTTTGCCCCAGTGTATCCTACCAGCCTAGTTTTCTTTCGA
TGGCAGCGGAGACTGTCCTGGTTGATGTTCAAGGAATGTCCGGCCGGGGCACAGTGGACG
CTTTGTTCATTCCTGCAGCGTGGTTATTTCTGAGGTGCTGCCAAAGCGGACTCGCTGGGC
TCTGGGGACAGAAAGAAAAGGTTGTCTGTGTCCTGCACAAGGGATTTGGAAGGTGAGGGT
CTGCCGGATGGAGGGAGTTGATGCTGGCAAATCACACGTTTGGACTGTATTTATTCCTTC
TCTTCATTCACTCTCGAGGGCTTTTTGTTTTTGTTTT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               185-303, - strand, RNAz p=0.812144

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               185-303, - strand, RNAz p=0.812144

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-457, gnl|bosTau2|chr3 (30412193-30411742)
               

               
               3-457, gnl|Hg17|chr1 (108970975-108971466)
               

               
               3-457, gnl|Mm7|chr3 (108704561-108704074)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-457, gnl|bosTau2|chr3 (30412193-30411742)
               

               
               3-457, gnl|Hg17|chr1 (108970975-108971466)
               

               
               3-457, gnl|Mm7|chr3 (108704561-108704074)

	3-457, gnl\|bosTau2\|chr3 (30412193-30411742)
	3-457, gnl\|Hg17\|chr1 (108970975-108971466)
	3-457, gnl\|Mm7\|chr3 (108704561-108704074)