Non-Coding RNA Search

Thy1-THY010012H10

Sequence:


               
               TTTTCTTTCCTCTCTCCAGGTTTGTTTGTTTGTTTGTTTTAATTAGACATTTTGTTTCTC
TAATCTTGAGTGGCAGGACTGGCCGGCTGGACCTTTGGAAAGGAGGCATTCTGTTCCCCG
ATCTTGAGTGGGTGGGCTGGCCAGACCCCTGGAGAAGAGGCATTTTGTCCCATAATTTGA
GTGGGAGGGTTGGCCAGACCCTTGGAGAGGAGGCATTCTGTCGCCTGTTCTTGAGTGGAC
TTTGGAAAATGACAGGCTGAGCGGAAATTTACAAAGGCGTCCCCCGGTGATTCCGGAGAT
GCAGGGCGCGGGGTGGGTGCTTGGGCCTCTCGTCCCTAGTGGCGGCGTGTTGTGCGTGTC
CGTGGCCCAGGGTCCACGCTTGGGCTGGGCAGCGCGCCTTCGGGAGGGAAAAGCGCAGGA
GGCGCCGTGGGCGGGCGCCTTTGGGGCGCCCTTTCGCGCGCGCGGCTTGCGGGGAAACCG
GCCTCCAGGGGACCCAGCGGGGAAGCCCGCGCGCCCCGCCCCCCGCGCGCGCTCTGAGTG
TGTCAGTTTTTGGAAACGTCGCGGCGAGGGGCGGGTTCGAGACGCTGGGACCGCCCGGGA
GCCGATGTTGGCTGCTGGCCCCGGTTCTCCGCGGTTCTCCGAGGTCGGAGGTTTCCAGCC
TGCTGCGCGCACCGGCGCATTCTATTTTTGTGCTTCCTGCGCCCGGAGGCGCGGCTGTGC
CCGGGCTCTGGCTTTTCCGGTTGGGCAGCTCCCAGTCGCCCAGGCGGGTGGCCTGAGCGA
TGGGCAGGGCAGGGAGGTGTCCCAGGGAACGGAAACTGAAAGTGGGGGAGAGCCTTCAAA
ACTCCAGCTGATCCACCTGCCTGCCCTGTTCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTCTTTCCTCTCTCCAGGTTTGTTTGTTTGTTTGTTTTAATTAGACATTTTGTTTCTC
TAATCTTGAGTGGCAGGACTGGCCGGCTGGACCTTTGGAAAGGAGGCATTCTGTTCCCCG
ATCTTGAGTGGGTGGGCTGGCCAGACCCCTGGAGAAGAGGCATTTTGTCCCATAATTTGA
GTGGGAGGGTTGGCCAGACCCTTGGAGAGGAGGCATTCTGTCGCCTGTTCTTGAGTGGAC
TTTGGAAAATGACAGGCTGAGCGGAAATTTACAAAGGCGTCCCCCGGTGATTCCGGAGAT
GCAGGGCGCGGGGTGGGTGCTTGGGCCTCTCGTCCCTAGTGGCGGCGTGTTGTGCGTGTC
CGTGGCCCAGGGTCCACGCTTGGGCTGGGCAGCGCGCCTTCGGGAGGGAAAAGCGCAGGA
GGCGCCGTGGGCGGGCGCCTTTGGGGCGCCCTTTCGCGCGCGCGGCTTGCGGGGAAACCG
GCCTCCAGGGGACCCAGCGGGGAAGCCCGCGCGCCCCGCCCCCCGCGCGCGCTCTGAGTG
TGTCAGTTTTTGGAAACGTCGCGGCGAGGGGCGGGTTCGAGACGCTGGGACCGCCCGGGA
GCCGATGTTGGCTGCTGGCCCCGGTTCTCCGCGGTTCTCCGAGGTCGGAGGTTTCCAGCC
TGCTGCGCGCACCGGCGCATTCTATTTTTGTGCTTCCTGCGCCCGGAGGCGCGGCTGTGC
CCGGGCTCTGGCTTTTCCGGTTGGGCAGCTCCCAGTCGCCCAGGCGGGTGGCCTGAGCGA
TGGGCAGGGCAGGGAGGTGTCCCAGGGAACGGAAACTGAAAGTGGGGGAGAGCCTTCAAA
ACTCCAGCTGATCCACCTGCCTGCCCTGTTCCT

Predicted RNA structure(s): 2 entry(ies)

More info

Predicted RNA structure(s): 2 entry(ies)

Help | Less info


               
               499-614, - strand, RNAz p=0.658577
               

               
               694-813, - strand, RNAz p=0.992595

Predicted RNA structure(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               499-614, - strand, RNAz p=0.658577
               

               
               694-813, - strand, RNAz p=0.992595

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               56-865, gnl|bosTau2|chr7 (18114653-18115453)
               

               
               56-865, gnl|Hg17|chr19 (2115759-2116600)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               56-865, gnl|bosTau2|chr7 (18114653-18115453)
               

               
               56-865, gnl|Hg17|chr19 (2115759-2116600)

	499-614, - strand, RNAz p=0.658577
	694-813, - strand, RNAz p=0.992595

	56-865, gnl\|bosTau2\|chr7 (18114653-18115453)
	56-865, gnl\|Hg17\|chr19 (2115759-2116600)