Non-Coding RNA Search

Thy1-THY010014A07

Sequence:


               
               AATTATCATTATGACATCTAGGAAAAGTATAAGTTTCACCCAACAGGTAATAACCATTGC
TCTCCAAAGGCAAGAGAGGAAAACCAGTCTCATCAACTAAGAATTAGTTGTGATAAAGAA
TCCTTGGTCTTCCTATATTTTTGAGAGGCAATGATGCATTCAGAGTACATATTAGAACTT
CCTTATTGTTTCGGTACATTCCCATGATATCAGAGTGCACTTTAATTCTCAATTTGTTAT
TGATACAGATCAACCAAGTGTAACCCTGTAGTTACTCATGTGTTTTTAGAGTTTCCCTTG
CATGCAGTTTTGTTTAACACGGGTCACAGTAATGGATCGTTTATACAAAATAATGGATTG
CTTCCTCTTTCTGCCAGCTGATTTGATCAGTCTGAAGTTCCTTATGTACTGTGGGTTACA
TAACTAGCATGGAATCCGTATGGTACATTTCTTAGTATGACAGTAACTGTATTAACCATT
TTTATTCTCTAAGTCTTTGAGGACATTTTAATAAACACAAAGAAGCCTCTTATTTTGAAG
TGAATAAACTTGAAATTAAAATGAGCAGTAAGTTACCATACGGGACTCAATTACCAGACT
TCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATTATCATTATGACATCTAGGAAAAGTATAAGTTTCACCCAACAGGTAATAACCATTGC
TCTCCAAAGGCAAGAGAGGAAAACCAGTCTCATCAACTAAGAATTAGTTGTGATAAAGAA
TCCTTGGTCTTCCTATATTTTTGAGAGGCAATGATGCATTCAGAGTACATATTAGAACTT
CCTTATTGTTTCGGTACATTCCCATGATATCAGAGTGCACTTTAATTCTCAATTTGTTAT
TGATACAGATCAACCAAGTGTAACCCTGTAGTTACTCATGTGTTTTTAGAGTTTCCCTTG
CATGCAGTTTTGTTTAACACGGGTCACAGTAATGGATCGTTTATACAAAATAATGGATTG
CTTCCTCTTTCTGCCAGCTGATTTGATCAGTCTGAAGTTCCTTATGTACTGTGGGTTACA
TAACTAGCATGGAATCCGTATGGTACATTTCTTAGTATGACAGTAACTGTATTAACCATT
TTTATTCTCTAAGTCTTTGAGGACATTTTAATAAACACAAAGAAGCCTCTTATTTTGAAG
TGAATAAACTTGAAATTAAAATGAGCAGTAAGTTACCATACGGGACTCAATTACCAGACT
TCTT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               1-117, - strand, RNAz p=0.575585

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-117, - strand, RNAz p=0.575585

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-577, gnl|bosTau2|chr11 (61779659-61779083)
               

               
               1-577, gnl|Hg17|chr2 (20868001-20867492)
               

               
               1-577, gnl|Mm7|chr12 (8216043-8216603)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-577, gnl|bosTau2|chr11 (61779659-61779083)
               

               
               1-577, gnl|Hg17|chr2 (20868001-20867492)
               

               
               1-577, gnl|Mm7|chr12 (8216043-8216603)

	1-577, gnl\|bosTau2\|chr11 (61779659-61779083)
	1-577, gnl\|Hg17\|chr2 (20868001-20867492)
	1-577, gnl\|Mm7\|chr12 (8216043-8216603)