Thy1-THY010016E12
|
GGGCAGCCGAGGTGGAATGGATTTTGGATCTGAACGAGGAGGAAAATGAGCTGGTGCGGA
GCGAATTTTACTATGAGCAGGCCCCCAGCGCCTCCTTGTGCATAGCCATCCTCAGTCTGC
ACCAGGACAGCATCGCCTGTGGCCACCAGCTGATCGAGCACTGCTGCAAGCTGTCCCAGG
GGCTCAGCAACCCAGAAGTGGATGCGGGGCTGCTCACAGACATCATGAAGCAGCTGCTCT
TCAGCGCCAAGATGATGTTTGTCAAGGCCGGCCGGAGCCAGGACCTGGCCCTTTGCGACA
GCTACATCAGCAAGGTAGACGTGCTGAATATTTTAGTTGCTGCCGCCTATCGCCACGTGC
CATCTCTGGATCAGATCTTGCAACCGGCTGCGGTAACCAGGCTAAGGAACCAGCTCTTGG
AAGCAGAGTACTATCAACTGGGCGTTGAGGTGAAGCTCTGACCAGGCTGACATCTACCCC
GCTGCAACGAGTTACCTTTGCCTAATCTTGCGGATGGGAACTGCCACCCTCCTCAGTTGT
CCTTGGCCACAGGGA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGGCAGCCGAGGTGGAATGGATTTTGGATCTGAACGAGGAGGAAAATGAGCTGGTGCGGA
GCGAATTTTACTATGAGCAGGCCCCCAGCGCCTCCTTGTGCATAGCCATCCTCAGTCTGC
ACCAGGACAGCATCGCCTGTGGCCACCAGCTGATCGAGCACTGCTGCAAGCTGTCCCAGG
GGCTCAGCAACCCAGAAGTGGATGCGGGGCTGCTCACAGACATCATGAAGCAGCTGCTCT
TCAGCGCCAAGATGATGTTTGTCAAGGCCGGCCGGAGCCAGGACCTGGCCCTTTGCGACA
GCTACATCAGCAAGGTAGACGTGCTGAATATTTTAGTTGCTGCCGCCTATCGCCACGTGC
CATCTCTGGATCAGATCTTGCAACCGGCTGCGGTAACCAGGCTAAGGAACCAGCTCTTGG
AAGCAGAGTACTATCAACTGGGCGTTGAGGTGAAGCTCTGACCAGGCTGACATCTACCCC
GCTGCAACGAGTTACCTTTGCCTAATCTTGCGGATGGGAACTGCCACCCTCCTCAGTTGT
CCTTGGCCACAGGGA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
149-245, - strand, RNAmicro p=0.978809 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
149-245, - strand, RNAmicro p=0.978809 |
|
78-304, gnl|bosTau2|chr10 (53728857-53728631) |
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78-304, gnl|canFam2|chr8 (44767940-44768174) |
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78-304, gnl|danRer3|chr13 (34645744-34645512) |
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78-304, gnl|dasNov1|scaffold_33849 (40440-40195) |
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78-304, gnl|echTel1|scaffold_277326 (66885-66651) |
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78-304, gnl|fr1|chrUn (288499232-288498999) |
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78-304, gnl|galGal2|chr5 (25815593-25815819) |
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78-304, gnl|hg17|chr14 (67302688-67302922) |
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78-304, gnl|Hg17|chr14 (67302920-67302694) |
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78-304, gnl|loxAfr1|scaffold_20838 (19502-19743) |
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78-304, gnl|mm7|chr12 (77210339-77210573) |
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78-304, gnl|Mm7|chr12 (77210571-77210345) |
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78-304, gnl|monDom2|scaffold_8 (83188054-83188282) |
|
78-304, gnl|oryCun1|scaffold_214380 (92398-92628) |
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78-304, gnl|panTro1|chr15 (66923347-66923581) |
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78-304, gnl|rheMac2|chr7 (130886342-130886576) |
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78-304, gnl|rn3|chr6 (102020179-102020413) |
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78-304, gnl|tetNig1|chr10 (11558579-11558352) |
|
78-304, gnl|xenTro1|scaffold_7 (1482958-1482731) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
78-304, gnl|bosTau2|chr10 (53728857-53728631) |
|
78-304, gnl|canFam2|chr8 (44767940-44768174) |
|
78-304, gnl|danRer3|chr13 (34645744-34645512) |
|
78-304, gnl|dasNov1|scaffold_33849 (40440-40195) |
|
78-304, gnl|echTel1|scaffold_277326 (66885-66651) |
|
78-304, gnl|fr1|chrUn (288499232-288498999) |
|
78-304, gnl|galGal2|chr5 (25815593-25815819) |
|
78-304, gnl|hg17|chr14 (67302688-67302922) |
|
78-304, gnl|Hg17|chr14 (67302920-67302694) |
|
78-304, gnl|loxAfr1|scaffold_20838 (19502-19743) |
|
78-304, gnl|mm7|chr12 (77210339-77210573) |
|
78-304, gnl|Mm7|chr12 (77210571-77210345) |
|
78-304, gnl|monDom2|scaffold_8 (83188054-83188282) |
|
78-304, gnl|oryCun1|scaffold_214380 (92398-92628) |
|
78-304, gnl|panTro1|chr15 (66923347-66923581) |
|
78-304, gnl|rheMac2|chr7 (130886342-130886576) |
|
78-304, gnl|rn3|chr6 (102020179-102020413) |
|
78-304, gnl|tetNig1|chr10 (11558579-11558352) |
|
78-304, gnl|xenTro1|scaffold_7 (1482958-1482731) |
