Non-Coding RNA Search

Thy1-THY010016G11

Sequence:


               
               AATTTTATTATGTTTACAGTTGTACAACCATCATCACAACCAAATTTTAGAACATTTCCA
TCCCAAACCCCCCACCCATCCCTCCCGACCCCAACCTGTCTCCTTTGATAACCATGAGTT
TTTCAAAGTTTCTGTTCTGCAAATAAGTTCATTTTATCCCCTTTTTAGATTCTACATATA
AGTGATAGCATGTGATGTTTGTGTCTCACTGTCTAacttagtatgataatttctaggacc
atccatgttgctgcacatgccattatttcacttctttttatggctgagtaatattccatt
gtgtatatgtaccacatcttctttgtccacttctctgttgatggacatttaggttgcttc
catgtcttggctgcagtaatgaacattggggtacatgtatcttttcgagtcatgtttttc
tctggatagatgcccaggagtgggattgctggatcatatggtaattctatttttagtttt
ttgaggactctccattctgttttccatagtggctgcaccaatttaca

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATTTTATTATGTTTACAGTTGTACAACCATCATCACAACCAAATTTTAGAACATTTCCA
TCCCAAACCCCCCACCCATCCCTCCCGACCCCAACCTGTCTCCTTTGATAACCATGAGTT
TTTCAAAGTTTCTGTTCTGCAAATAAGTTCATTTTATCCCCTTTTTAGATTCTACATATA
AGTGATAGCATGTGATGTTTGTGTCTCACTGTCTAacttagtatgataatttctaggacc
atccatgttgctgcacatgccattatttcacttctttttatggctgagtaatattccatt
gtgtatatgtaccacatcttctttgtccacttctctgttgatggacatttaggttgcttc
catgtcttggctgcagtaatgaacattggggtacatgtatcttttcgagtcatgtttttc
tctggatagatgcccaggagtgggattgctggatcatatggtaattctatttttagtttt
ttgaggactctccattctgttttccatagtggctgcaccaatttaca

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|62666669|ref|XP_576934.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|62666669|ref|XP_576934.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               288-475, + strand, RNAz p=0.936141

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               288-475, + strand, RNAz p=0.936141

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               55-527, gnl|bosTau2|chr10 (38942396-38941917)
               


               
               128-525, gnl|bosTau2|chr10 (20446991-20446587)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               55-527, gnl|bosTau2|chr10 (38942396-38941917)
               


               
               128-525, gnl|bosTau2|chr10 (20446991-20446587)

	55-527, gnl\|bosTau2\|chr10 (38942396-38941917)

	128-525, gnl\|bosTau2\|chr10 (20446991-20446587)