Non-Coding RNA Search

Thy1-THY010019C09

Sequence:


               
               CTTTGGCAGTACCCTCTGTTTAAGCCTTTTTCGCATTTTGCTCAGGAGACAGGTTCTCCG
GTTTGTCCCAGAGTCTTGTTGCATAAGTTGTTTTCATCAATTGAAAATACAAATGGGGAA
GGGGGCGGTGGGAGAAATCTAAACCCCTGCAAAGAAAACCTGCTTAAAAAGACAGGGTGT
TTCAGCTATTATGGTTTGTTGTACTGAGTATGAGGGGGTTTCCCTGGTCTTTTCCTAGGA
GCAGGTTTTGGTAGGAGGAAGACAGCATGAGGCCTCTGGATTGGCTCTGCCCACTCGCAA
CCACTACCCCCCATTCAGCAGTTCCAGGCTCCCAGAGCAGCCCTAGAGAGCTGGATAAAC
AAGGGCATGATAGCAGGTTGGTTTGCTCCCCACTAGGCAGTTTTTCCAATCTGATTCCTC
AGTCCTACAGAGCCACCTCCAATCCCCATTCCACGCCACTGGGATGTATCCTGCCAAGCG
ACCTCCCTCAAGGACATCCGGGTACTGAGGAGTACCTCCACAGCACCTATTCCATTCCCA
ACCCAACGAAGGCACAGTCCTAACCTTGGCCTTTGCCACCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTGGCAGTACCCTCTGTTTAAGCCTTTTTCGCATTTTGCTCAGGAGACAGGTTCTCCG
GTTTGTCCCAGAGTCTTGTTGCATAAGTTGTTTTCATCAATTGAAAATACAAATGGGGAA
GGGGGCGGTGGGAGAAATCTAAACCCCTGCAAAGAAAACCTGCTTAAAAAGACAGGGTGT
TTCAGCTATTATGGTTTGTTGTACTGAGTATGAGGGGGTTTCCCTGGTCTTTTCCTAGGA
GCAGGTTTTGGTAGGAGGAAGACAGCATGAGGCCTCTGGATTGGCTCTGCCCACTCGCAA
CCACTACCCCCCATTCAGCAGTTCCAGGCTCCCAGAGCAGCCCTAGAGAGCTGGATAAAC
AAGGGCATGATAGCAGGTTGGTTTGCTCCCCACTAGGCAGTTTTTCCAATCTGATTCCTC
AGTCCTACAGAGCCACCTCCAATCCCCATTCCACGCCACTGGGATGTATCCTGCCAAGCG
ACCTCCCTCAAGGACATCCGGGTACTGAGGAGTACCTCCACAGCACCTATTCCATTCCCA
ACCCAACGAAGGCACAGTCCTAACCTTGGCCTTTGCCACCAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               317-431, - strand, RNAz p=0.942135

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               317-431, - strand, RNAz p=0.942135

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-582, gnl|bosTau2|chr13 (54752160-54752766)
               

               
               2-582, gnl|Hg17|chr20 (44035331-44036664)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-582, gnl|bosTau2|chr13 (54752160-54752766)
               

               
               2-582, gnl|Hg17|chr20 (44035331-44036664)

	2-582, gnl\|bosTau2\|chr13 (54752160-54752766)
	2-582, gnl\|Hg17\|chr20 (44035331-44036664)