Thy1-THY010027G07
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TAATAAACACAGCCATCTACACAGAGAAGATAAGCACATAACTGTTGAGGATTTATGGAA ACGATGGAAAACATCGGAAGTTCATAATTGGACCCTTGAGGACACACTTCAGTGGTTGAT AGAATTTGTTGAACTACCCCAATATGAGAAGAATTTTAGAGACAATAATGTCAAAGGAAC AACGCTTCCCAGGATAGCAGTGCATGAACCTTCGTTTATGATCTCTCAGTTGAAAATCAG TGACCGGAGTCACAGACAGAAACTTCAGCTCAAGGCACTGGATGTGGTTTTGTTTGGACC TCTAACACGCCCTCCTCATAATTGGATGAAAGATTTTATCCTCACTGTTTCTATAGTAAT TGGTGTTGGAGGGTGCTGGTTTGCTTACACACAGAATAAGACATCAAAAGAACATGTTGC AAAAATGATGAAAGACTTAGAGAGTCTACAGACTGCAGAGCAAAGTCTCATGGACTTACA AGAGAGGCTTGAAAAGGCACAGGAAGAAAACAGAAATGTTGCTGTAGAAAAGCAAAACCT AGAGCGCAAAATGATGGATGAAATCAATTACGCAAAGGAGGAGGCTTGTCGGCTGAGAGA GCTAAGGGAGGGAGCTGAATGTGAATTGAGTAGACGTCAATATGCAGAGCAGGAATTGGA ACAGGTTCGAATGGCTTTAAAAAAGGCTGAAAAAGAATTTGAACTCAGAAGCAGCTGGTC TGTTCCAGATGCACTTCAAAAATGGCTTCAGCTAACGCACGAAGTAGAAGTCCAGTACTA CAATATTAAAAGGCAGAATGCTGAAATGCAACTAGCTATTGCTAAAGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TAATAAACACAGCCATCTACACAGAGAAGATAAGCACATAACTGTTGAGGATTTATGGAA ACGATGGAAAACATCGGAAGTTCATAATTGGACCCTTGAGGACACACTTCAGTGGTTGAT AGAATTTGTTGAACTACCCCAATATGAGAAGAATTTTAGAGACAATAATGTCAAAGGAAC AACGCTTCCCAGGATAGCAGTGCATGAACCTTCGTTTATGATCTCTCAGTTGAAAATCAG TGACCGGAGTCACAGACAGAAACTTCAGCTCAAGGCACTGGATGTGGTTTTGTTTGGACC TCTAACACGCCCTCCTCATAATTGGATGAAAGATTTTATCCTCACTGTTTCTATAGTAAT TGGTGTTGGAGGGTGCTGGTTTGCTTACACACAGAATAAGACATCAAAAGAACATGTTGC AAAAATGATGAAAGACTTAGAGAGTCTACAGACTGCAGAGCAAAGTCTCATGGACTTACA AGAGAGGCTTGAAAAGGCACAGGAAGAAAACAGAAATGTTGCTGTAGAAAAGCAAAACCT AGAGCGCAAAATGATGGATGAAATCAATTACGCAAAGGAGGAGGCTTGTCGGCTGAGAGA GCTAAGGGAGGGAGCTGAATGTGAATTGAGTAGACGTCAATATGCAGAGCAGGAATTGGA ACAGGTTCGAATGGCTTTAAAAAAGGCTGAAAAAGAATTTGAACTCAGAAGCAGCTGGTC TGTTCCAGATGCACTTCAAAAATGGCTTCAGCTAACGCACGAAGTAGAAGTCCAGTACTA CAATATTAAAAGGCAGAATGCTGAAATGCAACTAGCTATTGCTAAAGA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 485-603, + strand, RNAz p=0.513794 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 485-603, + strand, RNAz p=0.513794 |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 79-193, gnl|bosTau2|chr6 (24722712-24722826) | |
| 79-193, gnl|canFam2|chr3 (86411386-86411239) | |
| 79-193, gnl|danRer3|chr15 (44187577-44187443) | |
| 79-193, gnl|echTel1|scaffold_100700 (2340-2507) | |
| 79-193, gnl|fr1|chrUn (242198247-242198387) | |
| 79-193, gnl|galGal2|chr4 (73346965-73346809) | |
| 79-193, gnl|hg17|chr4 (26673248-26673409) | |
| 79-193, gnl|Hg17|chr4 (26673268-26673382) | |
| 79-193, gnl|loxAfr1|scaffold_55274 (12452-12285) | |
| 79-193, gnl|mm7|chr5 (53475863-53476013) | |
| 79-193, gnl|Mm7|chr5 (53475880-53475994) | |
| 79-193, gnl|monDom2|scaffold_10 (11089346-11089172) | |
| 79-193, gnl|oryCun1|scaffold_201120 (93335-93497) | |
| 79-193, gnl|panTro1|chr3 (27254301-27254462) | |
| 79-193, gnl|rheMac2|chr5 (21763938-21764099) | |
| 79-193, gnl|rn3|chr14 (61652307-61652153) | |
| 79-193, gnl|tetNig1|chr20 (561495-561328) | |
| 79-193, gnl|xenTro1|scaffold_536 (81972-81823) | |
| 485-666, gnl|bosTau2|chr6 (24730373-24730554) | |
| 485-666, gnl|canFam2|chr3 (86403247-86403034) | |
| 485-666, gnl|danRer3|chr7 (42671862-42672083) | |
| 485-666, gnl|dasNov1|scaffold_133 (159567-159366) | |
| 485-666, gnl|echTel1|scaffold_322351 (118606-118808) | |
| 485-666, gnl|fr1|chrUn (242199047-242199253) | |
| 485-666, gnl|galGal2|chr4 (73343790-73343579) | |
| 485-666, gnl|hg17|chr4 (26680803-26681005) | |
| 485-666, gnl|Hg17|chr4 (26680816-26680997) | |
| 485-666, gnl|loxAfr1|scaffold_55274 (4482-4280) | |
| 485-666, gnl|mm7|chr5 (53478511-53478715) | |
| 485-666, gnl|Mm7|chr5 (53478526-53478706) | |
| 485-666, gnl|monDom2|scaffold_10 (11071421-11071213) | |
| 485-666, gnl|oryCun1|scaffold_201120 (101239-101440) | |
| 485-666, gnl|panTro1|chr3 (27261848-27262050) | |
| 485-666, gnl|rheMac2|chr5 (21771640-21771842) | |
| 485-666, gnl|rn3|chr14 (61648995-61648791) | |
| 485-666, gnl|tetNig1|chr20 (560721-560534) | |
| 485-666, gnl|xenTro1|scaffold_536 (79148-78946) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 79-193, gnl|bosTau2|chr6 (24722712-24722826) | |
| 79-193, gnl|canFam2|chr3 (86411386-86411239) | |
| 79-193, gnl|danRer3|chr15 (44187577-44187443) | |
| 79-193, gnl|echTel1|scaffold_100700 (2340-2507) | |
| 79-193, gnl|fr1|chrUn (242198247-242198387) | |
| 79-193, gnl|galGal2|chr4 (73346965-73346809) | |
| 79-193, gnl|hg17|chr4 (26673248-26673409) | |
| 79-193, gnl|Hg17|chr4 (26673268-26673382) | |
| 79-193, gnl|loxAfr1|scaffold_55274 (12452-12285) | |
| 79-193, gnl|mm7|chr5 (53475863-53476013) | |
| 79-193, gnl|Mm7|chr5 (53475880-53475994) | |
| 79-193, gnl|monDom2|scaffold_10 (11089346-11089172) | |
| 79-193, gnl|oryCun1|scaffold_201120 (93335-93497) | |
| 79-193, gnl|panTro1|chr3 (27254301-27254462) | |
| 79-193, gnl|rheMac2|chr5 (21763938-21764099) | |
| 79-193, gnl|rn3|chr14 (61652307-61652153) | |
| 79-193, gnl|tetNig1|chr20 (561495-561328) | |
| 79-193, gnl|xenTro1|scaffold_536 (81972-81823) | |
| 485-666, gnl|bosTau2|chr6 (24730373-24730554) | |
| 485-666, gnl|canFam2|chr3 (86403247-86403034) | |
| 485-666, gnl|danRer3|chr7 (42671862-42672083) | |
| 485-666, gnl|dasNov1|scaffold_133 (159567-159366) | |
| 485-666, gnl|echTel1|scaffold_322351 (118606-118808) | |
| 485-666, gnl|fr1|chrUn (242199047-242199253) | |
| 485-666, gnl|galGal2|chr4 (73343790-73343579) | |
| 485-666, gnl|hg17|chr4 (26680803-26681005) | |
| 485-666, gnl|Hg17|chr4 (26680816-26680997) | |
| 485-666, gnl|loxAfr1|scaffold_55274 (4482-4280) | |
| 485-666, gnl|mm7|chr5 (53478511-53478715) | |
| 485-666, gnl|Mm7|chr5 (53478526-53478706) | |
| 485-666, gnl|monDom2|scaffold_10 (11071421-11071213) | |
| 485-666, gnl|oryCun1|scaffold_201120 (101239-101440) | |
| 485-666, gnl|panTro1|chr3 (27261848-27262050) | |
| 485-666, gnl|rheMac2|chr5 (21771640-21771842) | |
| 485-666, gnl|rn3|chr14 (61648995-61648791) | |
| 485-666, gnl|tetNig1|chr20 (560721-560534) | |
| 485-666, gnl|xenTro1|scaffold_536 (79148-78946) |