Non-Coding RNA Search

Thy1-THY010029B10

Sequence:


               
               ATAACTGACATTATTTGCTCCCATCTTATTTCATGCCCTCCTATATCAGAAGCAAACTTG
GAGTTTTCCTAGGGCACTGGAATCTTTGACTTCTAACATAAGCCAACTTATTTTACTGAA
GTTTATTTCTAATATATTCTCTTCACTAAATTACTGTGTCTTCAGGTACTTTCTTCTGAG
ATATAATCTTCCTACCATCTCCACAAATAATTCCTCATCTTTTACCAGTTTTTATCAATG
GCTGTGGGAGATTACTCTTTTTGTTTGTCTTCATCGCAAGTATGCATTGGAAAATGGAAA
GATTTGGAAATGTGACTTGAAGAAATATGGAAACGCTTTGGGATACAATAGGAACTCTGC
GTAGGAGACATCACAAGAACTCTTTAGTATCTATTGACCTTTCAAATGGAGGAGTTGAAA
AGAACTGTCTATCTTAAATGGTATTAATATTTCAAGATTGCTGCTAGATGCTGTGGTTAG
CAACAAGAGACCTGAACATGATTTGCCCAAATAACAAAATCACTTTAATTAAAACATTTT
TTTAACTTTGTTAAGTCCCATCTCCTTTCCTCTACCCAGAAAAATTATTTCATTTTTAAA
GATTAAGTTTTTTGTTTGAAATTTTTGAAGACTTTTTTGATATTTCTCCACAAAGCTGTA
TATAATTCTTTGATGCCAGGAGTTAGGCTTAGTGGTCTTTATTTCTCCACTACTTAATAT
AGCATCTGGAATATTATTGGTCCGGAAATGTTCTCTAAATAAGTGAGGTAATTGCATATA
TCTTTGGATCTTGTCAGATTTATCAAAGGAATAACTGTTTTCTTCCGTTTCTGTATCTCC
TAATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATAACTGACATTATTTGCTCCCATCTTATTTCATGCCCTCCTATATCAGAAGCAAACTTG
GAGTTTTCCTAGGGCACTGGAATCTTTGACTTCTAACATAAGCCAACTTATTTTACTGAA
GTTTATTTCTAATATATTCTCTTCACTAAATTACTGTGTCTTCAGGTACTTTCTTCTGAG
ATATAATCTTCCTACCATCTCCACAAATAATTCCTCATCTTTTACCAGTTTTTATCAATG
GCTGTGGGAGATTACTCTTTTTGTTTGTCTTCATCGCAAGTATGCATTGGAAAATGGAAA
GATTTGGAAATGTGACTTGAAGAAATATGGAAACGCTTTGGGATACAATAGGAACTCTGC
GTAGGAGACATCACAAGAACTCTTTAGTATCTATTGACCTTTCAAATGGAGGAGTTGAAA
AGAACTGTCTATCTTAAATGGTATTAATATTTCAAGATTGCTGCTAGATGCTGTGGTTAG
CAACAAGAGACCTGAACATGATTTGCCCAAATAACAAAATCACTTTAATTAAAACATTTT
TTTAACTTTGTTAAGTCCCATCTCCTTTCCTCTACCCAGAAAAATTATTTCATTTTTAAA
GATTAAGTTTTTTGTTTGAAATTTTTGAAGACTTTTTTGATATTTCTCCACAAAGCTGTA
TATAATTCTTTGATGCCAGGAGTTAGGCTTAGTGGTCTTTATTTCTCCACTACTTAATAT
AGCATCTGGAATATTATTGGTCCGGAAATGTTCTCTAAATAAGTGAGGTAATTGCATATA
TCTTTGGATCTTGTCAGATTTATCAAAGGAATAACTGTTTTCTTCCGTTTCTGTATCTCC
TAATT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               39-141, - strand, RNAz p=0.684247

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               39-141, - strand, RNAz p=0.684247

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-733, gnl|bosTau2|chr6 (34751484-34752191)
               

               
               1-733, gnl|Hg17|chr4 (54767659-54766912)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-733, gnl|bosTau2|chr6 (34751484-34752191)
               

               
               1-733, gnl|Hg17|chr4 (54767659-54766912)

	1-733, gnl\|bosTau2\|chr6 (34751484-34752191)
	1-733, gnl\|Hg17\|chr4 (54767659-54766912)