Thy1-THY010029H06
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGTCCGTGGGGGCCTGGAGGCAAAGCATCGCCGGGGGCTCCTCTCTCCGCAGCCCTCCTC ACCCAGCTGGAAGGGCTCTCCTCATTCCCCACTCACTCCCTCATTAAGGACCATTTATGG CGGGATCCTTTGGCTTCTCCCTCTCAGGGAAGCTGTTACTACCCGCTCGCGTACTGCACA CTTGAGATGTAATTGACTGTGACAAGTTTTATGCGACAGTACAGGAACTCTTTGGTCCGG AAGTGAAGAGTCAAGATGTGAAATGCTTTTACAGGAAACTCTGCAACAACCCTGATGCAT CTATAGACTGGTGTGAGATCTTTGGATACTTCTCCTCTGAAGAAGGTTTTCTTACTTCCC AAATGGATGAAGAAAACTTGGTTTTCCTCGTTTCAAGAAAACAGCGAGTTGTCATTTCAG GGAGCAGAAGACGGGATGTGGTTAAGTGCGTTGTCAAGGTTCCGCAGCTGGATTTACTGA TAACAGCGTCTCAGAAGGGACTGATAACAGTCTTCAATAGCCAGATGAGAGTTCAGACCA GCACCAATGTTACAGTAAGACACCTCCTGGATCACAGGATGTGACTACCTCTCGCAGCTG AAGCGAATTGTTGCTACGACTGAAAGGACCATTATTGTCTGGGATTATAAAGCTCAAGGG AGCAGCCAGGAAAACTATTTTGTCATAAAGCCCATGGATCACTGCCTCCTCTGCGTGTGT GTGGCGTCCCTGCCTGACCAGCTCTGCCGGGATGAGATCCTCTTGGGGGATGATGGAGGT TTCGTGAACAAATTCACGGTAAACAGTGATGACTTTGGACTGAAGCAGGCAAAATCCAAA C |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGTCCGTGGGGGCCTGGAGGCAAAGCATCGCCGGGGGCTCCTCTCTCCGCAGCCCTCCTC ACCCAGCTGGAAGGGCTCTCCTCATTCCCCACTCACTCCCTCATTAAGGACCATTTATGG CGGGATCCTTTGGCTTCTCCCTCTCAGGGAAGCTGTTACTACCCGCTCGCGTACTGCACA CTTGAGATGTAATTGACTGTGACAAGTTTTATGCGACAGTACAGGAACTCTTTGGTCCGG AAGTGAAGAGTCAAGATGTGAAATGCTTTTACAGGAAACTCTGCAACAACCCTGATGCAT CTATAGACTGGTGTGAGATCTTTGGATACTTCTCCTCTGAAGAAGGTTTTCTTACTTCCC AAATGGATGAAGAAAACTTGGTTTTCCTCGTTTCAAGAAAACAGCGAGTTGTCATTTCAG GGAGCAGAAGACGGGATGTGGTTAAGTGCGTTGTCAAGGTTCCGCAGCTGGATTTACTGA TAACAGCGTCTCAGAAGGGACTGATAACAGTCTTCAATAGCCAGATGAGAGTTCAGACCA GCACCAATGTTACAGTAAGACACCTCCTGGATCACAGGATGTGACTACCTCTCGCAGCTG AAGCGAATTGTTGCTACGACTGAAAGGACCATTATTGTCTGGGATTATAAAGCTCAAGGG AGCAGCCAGGAAAACTATTTTGTCATAAAGCCCATGGATCACTGCCTCCTCTGCGTGTGT GTGGCGTCCCTGCCTGACCAGCTCTGCCGGGATGAGATCCTCTTGGGGGATGATGGAGGT TTCGTGAACAAATTCACGGTAAACAGTGATGACTTTGGACTGAAGCAGGCAAAATCCAAA C |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 723-840, + strand, RNAz p=0.548709 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 723-840, + strand, RNAz p=0.548709 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of NM_144625, + |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 178-317, gnl|bosTau2|chr16 (23915064-23914925) | |
| 178-317, gnl|canFam2|chr7 (36023251-36023441) | |
| 178-317, gnl|dasNov1|scaffold_5251 (16577-16392) | |
| 178-317, gnl|galGal2|chr3 (32088543-32088357) | |
| 178-317, gnl|hg17|chr1 (238149819-238150007) | |
| 178-317, gnl|Hg17|chr1 (238149865-238150003) | |
| 178-317, gnl|mm7|chr1 (175672172-175672362) | |
| 178-317, gnl|Mm7|chr1 (175672219-175672358) | |
| 178-317, gnl|monDom2|scaffold_13 (42356290-42356096) | |
| 178-317, gnl|oryCun1|scaffold_214734 (7780-7969) | |
| 178-317, gnl|panTro1|chr1 (222159781-222159969) | |
| 178-317, gnl|rheMac2|chr1 (215390248-215390060) | |
| 178-317, gnl|rn3|chr13 (91628748-91628938) | |
| 397-524, gnl|bosTau2|chr16 (23905790-23905663) | |
| 397-524, gnl|canFam2|chr7 (36040070-36040198) | |
| 397-524, gnl|hg17|chr1 (238163954-238164098) | |
| 397-524, gnl|Hg17|chr1 (238163962-238164090) | |
| 397-524, gnl|loxAfr1|scaffold_1717 (137299-137426) | |
| 397-524, gnl|mm7|chr1 (175686528-175686655) | |
| 397-524, gnl|Mm7|chr1 (175686536-175686664) | |
| 397-524, gnl|monDom2|scaffold_13 (42323399-42323239) | |
| 397-524, gnl|oryCun1|scaffold_214734 (19492-19617) | |
| 397-524, gnl|panTro1|chr1 (222173938-222174082) | |
| 397-524, gnl|rheMac2|chr8 (37941650-37941506) | |
| 397-524, gnl|rn3|chr13 (91643035-91643160) | |
| 668-840, gnl|bosTau2|chr16 (23897893-23897721) | |
| 668-840, gnl|canFam2|chr7 (36047429-36047661) | |
| 668-840, gnl|dasNov1|scaffold_92781 (1728-1960) | |
| 668-840, gnl|echTel1|scaffold_284071 (290-522) | |
| 668-840, gnl|galGal2|chr3 (32071854-32071615) | |
| 668-840, gnl|hg17|chr1 (238172819-238173051) | |
| 668-840, gnl|Hg17|chr1 (238172828-238173000) | |
| 668-840, gnl|mm7|chr1 (175695055-175695287) | |
| 668-840, gnl|Mm7|chr1 (175695064-175695236) | |
| 668-840, gnl|monDom2|scaffold_13 (42304465-42304233) | |
| 668-840, gnl|oryCun1|scaffold_214734 (26361-26593) | |
| 668-840, gnl|panTro1|chr1 (222183149-222183381) | |
| 668-840, gnl|rheMac2|chr1 (215367132-215366900) | |
| 668-840, gnl|rn3|chr13 (91651935-91652167) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 178-317, gnl|bosTau2|chr16 (23915064-23914925) | |
| 178-317, gnl|canFam2|chr7 (36023251-36023441) | |
| 178-317, gnl|dasNov1|scaffold_5251 (16577-16392) | |
| 178-317, gnl|galGal2|chr3 (32088543-32088357) | |
| 178-317, gnl|hg17|chr1 (238149819-238150007) | |
| 178-317, gnl|Hg17|chr1 (238149865-238150003) | |
| 178-317, gnl|mm7|chr1 (175672172-175672362) | |
| 178-317, gnl|Mm7|chr1 (175672219-175672358) | |
| 178-317, gnl|monDom2|scaffold_13 (42356290-42356096) | |
| 178-317, gnl|oryCun1|scaffold_214734 (7780-7969) | |
| 178-317, gnl|panTro1|chr1 (222159781-222159969) | |
| 178-317, gnl|rheMac2|chr1 (215390248-215390060) | |
| 178-317, gnl|rn3|chr13 (91628748-91628938) | |
| 397-524, gnl|bosTau2|chr16 (23905790-23905663) | |
| 397-524, gnl|canFam2|chr7 (36040070-36040198) | |
| 397-524, gnl|hg17|chr1 (238163954-238164098) | |
| 397-524, gnl|Hg17|chr1 (238163962-238164090) | |
| 397-524, gnl|loxAfr1|scaffold_1717 (137299-137426) | |
| 397-524, gnl|mm7|chr1 (175686528-175686655) | |
| 397-524, gnl|Mm7|chr1 (175686536-175686664) | |
| 397-524, gnl|monDom2|scaffold_13 (42323399-42323239) | |
| 397-524, gnl|oryCun1|scaffold_214734 (19492-19617) | |
| 397-524, gnl|panTro1|chr1 (222173938-222174082) | |
| 397-524, gnl|rheMac2|chr8 (37941650-37941506) | |
| 397-524, gnl|rn3|chr13 (91643035-91643160) | |
| 668-840, gnl|bosTau2|chr16 (23897893-23897721) | |
| 668-840, gnl|canFam2|chr7 (36047429-36047661) | |
| 668-840, gnl|dasNov1|scaffold_92781 (1728-1960) | |
| 668-840, gnl|echTel1|scaffold_284071 (290-522) | |
| 668-840, gnl|galGal2|chr3 (32071854-32071615) | |
| 668-840, gnl|hg17|chr1 (238172819-238173051) | |
| 668-840, gnl|Hg17|chr1 (238172828-238173000) | |
| 668-840, gnl|mm7|chr1 (175695055-175695287) | |
| 668-840, gnl|Mm7|chr1 (175695064-175695236) | |
| 668-840, gnl|monDom2|scaffold_13 (42304465-42304233) | |
| 668-840, gnl|oryCun1|scaffold_214734 (26361-26593) | |
| 668-840, gnl|panTro1|chr1 (222183149-222183381) | |
| 668-840, gnl|rheMac2|chr1 (215367132-215366900) | |
| 668-840, gnl|rn3|chr13 (91651935-91652167) |