Non-Coding RNA Search

Thy1-THY010030A06

Sequence:


               
               ATGGGGCATGGGCTAGCGAGGGAAATGAGTCTGGGAACAAGCTGTTCAGGCGCTTCCGAA
AAATGAATGCCAGGCAGTCCAAGTACTATGAAATGGAAGATGTTTTGAAACATCACTGGT
TGTACACCTCCAAATACCTGCAGAAGTTTATGAATGCTCATAAAGCATTTAAAAACTCAG
GGTTTACCATAAACTTGCAGAGAAGCTCAGGGGACACATTAGACTTAGAGAACTCTCCAG
AATCTCAAGATTTGATGGAATTTTAAGCAGGGAAGCTGCCTAGGCATTGGTTTTGCAAAT
GGGTTTTCTCTGGGTTGCATGGAGAGCTTCTCCTGGCACCCTTAACTCCTGGGTGTGGGG
CTTCACCACACAAATGGTGGTAGGTTGATGAGGCCAGAGATGGTGAACCCATGTCAGGAA
TAGGTAACTGGTAAGCCGATTGCTTGAGCTGTTTAGGGAGTTCAGAAAAGCAACAGGAGA
AACCAGTTATTTGAAAGCTCCATAGCTGAGAACAGGGGTAACTGCAGGGGACCAGAGGTG
AACAAAGATGTATGTGGAGAGGATTGAGTGATGCCAAAGTCAAAGCCAAGGTTGTCAAAG
GACAGCCAGTGAGGCCAGAAAAGGAATTTGACTTGTGGTTTCCATTCCCCCTGCCCAAGT
TATTCTAGTTTATACTGAGAGGTGTTTTTCATATCACTTTTGCAGAATTTTTTATTTTAT
AAATTTCACAATATTTATGACATTTTAATGTTTCTCATTAGAAGTACTTGGGCTTTGTTC
CTTGCGGGGAATGAGAGGAGGGAGCAAGGGACGCTGGCGTACATTTGACTTTTCTTGCTA
ATGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGGGGCATGGGCTAGCGAGGGAAATGAGTCTGGGAACAAGCTGTTCAGGCGCTTCCGAA
AAATGAATGCCAGGCAGTCCAAGTACTATGAAATGGAAGATGTTTTGAAACATCACTGGT
TGTACACCTCCAAATACCTGCAGAAGTTTATGAATGCTCATAAAGCATTTAAAAACTCAG
GGTTTACCATAAACTTGCAGAGAAGCTCAGGGGACACATTAGACTTAGAGAACTCTCCAG
AATCTCAAGATTTGATGGAATTTTAAGCAGGGAAGCTGCCTAGGCATTGGTTTTGCAAAT
GGGTTTTCTCTGGGTTGCATGGAGAGCTTCTCCTGGCACCCTTAACTCCTGGGTGTGGGG
CTTCACCACACAAATGGTGGTAGGTTGATGAGGCCAGAGATGGTGAACCCATGTCAGGAA
TAGGTAACTGGTAAGCCGATTGCTTGAGCTGTTTAGGGAGTTCAGAAAAGCAACAGGAGA
AACCAGTTATTTGAAAGCTCCATAGCTGAGAACAGGGGTAACTGCAGGGGACCAGAGGTG
AACAAAGATGTATGTGGAGAGGATTGAGTGATGCCAAAGTCAAAGCCAAGGTTGTCAAAG
GACAGCCAGTGAGGCCAGAAAAGGAATTTGACTTGTGGTTTCCATTCCCCCTGCCCAAGT
TATTCTAGTTTATACTGAGAGGTGTTTTTCATATCACTTTTGCAGAATTTTTTATTTTAT
AAATTTCACAATATTTATGACATTTTAATGTTTCTCATTAGAAGTACTTGGGCTTTGTTC
CTTGCGGGGAATGAGAGGAGGGAGCAAGGGACGCTGGCGTACATTTGACTTTTCTTGCTA
ATGT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|26352848|dbj|BAC40054.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|26352848|dbj|BAC40054.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               281-431, + strand, RNAz p=0.887229

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               281-431, + strand, RNAz p=0.887229

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of NM_000448, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of NM_000448, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-726, gnl|bosTau2|chr15 (41169847-41169136)
               

               
               2-726, gnl|Hg17|chr11 (36554298-36555032)
               

               
               2-726, gnl|Mm7|chr2 (101492653-101491895)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-726, gnl|bosTau2|chr15 (41169847-41169136)
               

               
               2-726, gnl|Hg17|chr11 (36554298-36555032)
               

               
               2-726, gnl|Mm7|chr2 (101492653-101491895)

	2-726, gnl\|bosTau2\|chr15 (41169847-41169136)
	2-726, gnl\|Hg17\|chr11 (36554298-36555032)
	2-726, gnl\|Mm7\|chr2 (101492653-101491895)