Non-Coding RNA Search

Thy1-THY010031A08

Sequence:


               
               AGTTATTACCAAATCAAATCTATTCTTCTTGCTTTGGCTAGTGTCCAGGTTTGTTTATCT
TTGACAATGTCTTATCACTTCAAATTTGTGGCATCTGAGATAAAAATATTAAAAGTCTTT
GTTTGCAAAAAAAACTGAACACCAGATGAAAGAGATGCGTTACCTGCTCTAGAAAATACG
ATGCTGAACTGGCCCACCTGGTACCCCTTCTAGATCCAGTGTCCAAACACATGTTCATTG
GTTTCTCATGTTTTCTCCTCACTCTTTTTCTCCCAACCTTGAGTGCCTTCTCCCTACATC
TCTCTGCATCTAACGGCTAAGACCCCTGAGCCTACCTAGAGGAGGGAACTTTGTCCCTGG
TCACAGGTGTGATCCATGGCCTGGAGTTGGCCCCCAGCTCGTCCACTTGGCTGGCTTTGC
TGCTCATCTCATCCAGTTATGCCCCATGAGGGCAAGGGCATCACTGGGGCCATTATGTAG
ACCTCATCTTTTGACCTTTGACTGTCTTCTTACATGGAGTAGGCCTCAGGAAATATTTTC
TCAAACAGTGATTTATCTGGTGAATATGAAACGAACAAAAGGAACTTATGATTACCAAGA
GCAGTTTTTGTCTCTGCATTTTTTTCTACAATGCATCAGTGTTACCACTGTGATCAGCAA
AGTAATGAATACTATTTTTATAAGTTCAAGAGCATGCAGTGTAAACTCTAGTCCTGCTCT
GGTTCAGATTATTTTCAAAATGTATCAATTTTAAATTAATGAAAATGCTCATAGTCTCAT
TTAATGAGGTACAAAAAAAATCAAGGCAAGACTCTCTTGATATTAAGTATATCAAGAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTTATTACCAAATCAAATCTATTCTTCTTGCTTTGGCTAGTGTCCAGGTTTGTTTATCT
TTGACAATGTCTTATCACTTCAAATTTGTGGCATCTGAGATAAAAATATTAAAAGTCTTT
GTTTGCAAAAAAAACTGAACACCAGATGAAAGAGATGCGTTACCTGCTCTAGAAAATACG
ATGCTGAACTGGCCCACCTGGTACCCCTTCTAGATCCAGTGTCCAAACACATGTTCATTG
GTTTCTCATGTTTTCTCCTCACTCTTTTTCTCCCAACCTTGAGTGCCTTCTCCCTACATC
TCTCTGCATCTAACGGCTAAGACCCCTGAGCCTACCTAGAGGAGGGAACTTTGTCCCTGG
TCACAGGTGTGATCCATGGCCTGGAGTTGGCCCCCAGCTCGTCCACTTGGCTGGCTTTGC
TGCTCATCTCATCCAGTTATGCCCCATGAGGGCAAGGGCATCACTGGGGCCATTATGTAG
ACCTCATCTTTTGACCTTTGACTGTCTTCTTACATGGAGTAGGCCTCAGGAAATATTTTC
TCAAACAGTGATTTATCTGGTGAATATGAAACGAACAAAAGGAACTTATGATTACCAAGA
GCAGTTTTTGTCTCTGCATTTTTTTCTACAATGCATCAGTGTTACCACTGTGATCAGCAA
AGTAATGAATACTATTTTTATAAGTTCAAGAGCATGCAGTGTAAACTCTAGTCCTGCTCT
GGTTCAGATTATTTTCAAAATGTATCAATTTTAAATTAATGAAAATGCTCATAGTCTCAT
TTAATGAGGTACAAAAAAAATCAAGGCAAGACTCTCTTGATATTAAGTATATCAAGAAC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               349-467, + strand, RNAz p=0.786343

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               349-467, + strand, RNAz p=0.786343

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-725, gnl|bosTau2|chr26 (7698456-7699193)
               

               
               1-725, gnl|Hg17|chr10 (98059984-98060669)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-725, gnl|bosTau2|chr26 (7698456-7699193)
               

               
               1-725, gnl|Hg17|chr10 (98059984-98060669)

	1-725, gnl\|bosTau2\|chr26 (7698456-7699193)
	1-725, gnl\|Hg17\|chr10 (98059984-98060669)