Non-Coding RNA Search

Thy1-THY010031E09

Sequence:


               
               ATCCAAGCCCCCCATGAATCCCATTCTCCTTGAGCATCTAAGGTCATGACTTTGTGGGTA
CCAGGCGTCCCCACCCCGCTACCTTGCCTCCTAAGAGATTTAATGTCTTAACTCACTGAG
CTGCAGGTCAAACAGCACCTGGGGAGAGAGACACCAACTGAAACCTCTCCTAGCTGTGTG
ACCTTAAGCATGTTACCTAACCTCTCTGTGCTTTCATTTCCTCCTCCGAAAAGTAGAGGC
AGTAGCCTGCGTCGCCAGGTTATAGGCAGATTGCATGAGATAAGGATGAAACGCACTTTG
AGCCGGGACAGCGTGTGGAAAATGCCAGTTGTTGCCTCACTCCGTGTGCCCTGGGTAGAA
ACTGCCAGCTTTGTTCTTTGCCACCTGGAGGTCCTGGCAGGCAGGAGGCTGGGGTTCAGC
GGCCTTGTTCCCTAGGGGTGGCTGGCACCGGGCTTGGCACGAGGTGAGCTCTGGATTGAT
AAACAGCTGCAGGGTTGCAGGGGGGGCCTCCCTCTCTCCCTCTCTGGGAGCTGCAGGGGA
CGCCCGCTCCCCCCAACCCGCCGCCACCGCCAGGCCCCTTTGTCCACACGGCCGCCTCCC
GGTGCAGAGAAACCGCAGGCTGGGCTGCGCCACTCAGCCTTATCTCAGGCCTTTTGCAGA
CAACCCTGGCCCCGGGAAAGGGGTTTATCAGCCCGGTCATCTGTGCCCCGGTAGGTTCAG
AGGGGCAGAGAGCTTGGAGGGGAGCCTGGCAGGGGGCAGGGCCCACCCACACTGGCCTGG
CGAGGTCCCCTCCTCCAGGCGGGCTTTGGGCGCACAGGAAGGGCCGAGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCCAAGCCCCCCATGAATCCCATTCTCCTTGAGCATCTAAGGTCATGACTTTGTGGGTA
CCAGGCGTCCCCACCCCGCTACCTTGCCTCCTAAGAGATTTAATGTCTTAACTCACTGAG
CTGCAGGTCAAACAGCACCTGGGGAGAGAGACACCAACTGAAACCTCTCCTAGCTGTGTG
ACCTTAAGCATGTTACCTAACCTCTCTGTGCTTTCATTTCCTCCTCCGAAAAGTAGAGGC
AGTAGCCTGCGTCGCCAGGTTATAGGCAGATTGCATGAGATAAGGATGAAACGCACTTTG
AGCCGGGACAGCGTGTGGAAAATGCCAGTTGTTGCCTCACTCCGTGTGCCCTGGGTAGAA
ACTGCCAGCTTTGTTCTTTGCCACCTGGAGGTCCTGGCAGGCAGGAGGCTGGGGTTCAGC
GGCCTTGTTCCCTAGGGGTGGCTGGCACCGGGCTTGGCACGAGGTGAGCTCTGGATTGAT
AAACAGCTGCAGGGTTGCAGGGGGGGCCTCCCTCTCTCCCTCTCTGGGAGCTGCAGGGGA
CGCCCGCTCCCCCCAACCCGCCGCCACCGCCAGGCCCCTTTGTCCACACGGCCGCCTCCC
GGTGCAGAGAAACCGCAGGCTGGGCTGCGCCACTCAGCCTTATCTCAGGCCTTTTGCAGA
CAACCCTGGCCCCGGGAAAGGGGTTTATCAGCCCGGTCATCTGTGCCCCGGTAGGTTCAG
AGGGGCAGAGAGCTTGGAGGGGAGCCTGGCAGGGGGCAGGGCCCACCCACACTGGCCTGG
CGAGGTCCCCTCCTCCAGGCGGGCTTTGGGCGCACAGGAAGGGCCGAGCC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               459-675, - strand, RNAz p=0.762291

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               459-675, - strand, RNAz p=0.762291

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               112-825, gnl|bosTau2|chr18 (11472646-11471931)
               

               
               112-825, gnl|Hg17|chr16 (83968496-83969323)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               112-825, gnl|bosTau2|chr18 (11472646-11471931)
               

               
               112-825, gnl|Hg17|chr16 (83968496-83969323)

	112-825, gnl\|bosTau2\|chr18 (11472646-11471931)
	112-825, gnl\|Hg17\|chr16 (83968496-83969323)