Non-Coding RNA Search

Thy1-THY010043G01

Sequence:


               
               TTTATTTTTACTTTTCTTTCACATTGAATTATTTCGTGTGTGTGGCAACTTCTGTTTTTA
GGAAGCGGAAGAAGCCAGCAAACATGTTGAATTGTTCTGACAATACCCTGCTGGCATGTT
GCCCGGGTCAGCAGTGCTTCTGCTGAGCCGTATTGAAATCACCTCCAGGCCAGTGTGAAA
AGTTTGCAGGTGCAGACATTCTGTCTCACTGGCCCAGGCGGGGCCTCATAACCCCATTGT
GTTTCTTGATAAAAGGTAACCCCACCCTTCAAGACAGCAAAGATAGCTGTGAAATAAGGG
AGGCTATTCATTGCTTTGAAGTCAATCGAACGGGCCTTAGGCACAGGCACAGGCAGTTAG
GAAATAATGTCATTTGGATTTTGTCTTGATTGGGGCTGCCCCCAATGCACCTTCTAGGAC
ATCCTTTTTTATGGTGACTGCTTCCGAATATGACTAACTTTATCTAAAGTAAACCTTGAG
TAGCATTTTTTTTTTCTTTTAGCCAGACTTAGAAACTTGAGTATCAACAGGAGCAGAACA
ACAGCAGCAAAATAAAGGGAAAAGGAGCAGAACAGATTCACAACTTAGAGGCCAAACTGA
GGGTCCCCCCTCCCTGGGACCTCACAGTTCTAACTCAAGACTGGCAGTCTCTGGCACGTG
AATTCATAAGGACTTGAGTGTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTATTTTTACTTTTCTTTCACATTGAATTATTTCGTGTGTGTGGCAACTTCTGTTTTTA
GGAAGCGGAAGAAGCCAGCAAACATGTTGAATTGTTCTGACAATACCCTGCTGGCATGTT
GCCCGGGTCAGCAGTGCTTCTGCTGAGCCGTATTGAAATCACCTCCAGGCCAGTGTGAAA
AGTTTGCAGGTGCAGACATTCTGTCTCACTGGCCCAGGCGGGGCCTCATAACCCCATTGT
GTTTCTTGATAAAAGGTAACCCCACCCTTCAAGACAGCAAAGATAGCTGTGAAATAAGGG
AGGCTATTCATTGCTTTGAAGTCAATCGAACGGGCCTTAGGCACAGGCACAGGCAGTTAG
GAAATAATGTCATTTGGATTTTGTCTTGATTGGGGCTGCCCCCAATGCACCTTCTAGGAC
ATCCTTTTTTATGGTGACTGCTTCCGAATATGACTAACTTTATCTAAAGTAAACCTTGAG
TAGCATTTTTTTTTTCTTTTAGCCAGACTTAGAAACTTGAGTATCAACAGGAGCAGAACA
ACAGCAGCAAAATAAAGGGAAAAGGAGCAGAACAGATTCACAACTTAGAGGCCAAACTGA
GGGTCCCCCCTCCCTGGGACCTCACAGTTCTAACTCAAGACTGGCAGTCTCTGGCACGTG
AATTCATAAGGACTTGAGTGTGG

Predicted RNA structure(s): 2 entry(ies)

More info

Predicted RNA structure(s): 2 entry(ies)

Help | Less info


               
               41-239, - strand, RNAz p=0.991297
               

               
               357-474, + strand, RNAz p=0.566812

Predicted RNA structure(s): 2 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               41-239, - strand, RNAz p=0.991297
               

               
               357-474, + strand, RNAz p=0.566812

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               2-603, gnl|bosTau2|chr27 (7697530-7696946)
               

               
               2-603, gnl|Hg17|chr4 (185703606-185703037)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-603, gnl|bosTau2|chr27 (7697530-7696946)
               

               
               2-603, gnl|Hg17|chr4 (185703606-185703037)

	41-239, - strand, RNAz p=0.991297
	357-474, + strand, RNAz p=0.566812

	2-603, gnl\|bosTau2\|chr27 (7697530-7696946)
	2-603, gnl\|Hg17\|chr4 (185703606-185703037)