Non-Coding RNA Search

Thy1-THY010044F09

Sequence:


               
               CTTCCTGTTCCAAGTTGTCCATGTATTTTGGGGGGATTGGGGTCTGAgcctgcagcatgc
agaagttcctaggccagggatggaacccacaccacagcagtgactggacctactgcagga
gcaatgctggatccttaaccccctgagccatgagggaactACTGTACATTCATTTTTGAT
TGGAGAGGCTGAGGGAAGGGGCGTGGTCCCAGTGGCAGGTTGGCTCTGGGGCCCAGGAAG
GGAGAGTGACATCTCAGAATGACTCCCCGCAGATCCTTCTCCCCCCTGGTCAGCACCCAG
ACCCAGGAGCCCCCTCCACCTGCCCTTCCCCCACCATGATCTCTGGTTTTCTCTGCTGGG
TGGCCTTTTGTCTCCTGTAGGCAGGTGAGTCCTGGGCAGGGAACCTTGCAGGGTCCCAGC
ACTAAGCCTTGCCACTGTGGCAGCAGCGTCAGCCTCATCTTCTCCACAGGTCCAGTGAGT
GCTGGTGTCACTCAGCCCCCCAGATTCCAGGTCCTGAGGACAGGCCAGAGCATGACACTG
AACCGTGCCCAAGATCTGAAACATGACTCTATGTCCTGGTACCGACAAGACTCTGGACAG
GAGCTGAGGCTGATCCATTACTCAGTTGGCAGTGGCATCACTGACAAANGAGACGTCCCC
GACGGCTACAGCGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTCCTGTTCCAAGTTGTCCATGTATTTTGGGGGGATTGGGGTCTGAgcctgcagcatgc
agaagttcctaggccagggatggaacccacaccacagcagtgactggacctactgcagga
gcaatgctggatccttaaccccctgagccatgagggaactACTGTACATTCATTTTTGAT
TGGAGAGGCTGAGGGAAGGGGCGTGGTCCCAGTGGCAGGTTGGCTCTGGGGCCCAGGAAG
GGAGAGTGACATCTCAGAATGACTCCCCGCAGATCCTTCTCCCCCCTGGTCAGCACCCAG
ACCCAGGAGCCCCCTCCACCTGCCCTTCCCCCACCATGATCTCTGGTTTTCTCTGCTGGG
TGGCCTTTTGTCTCCTGTAGGCAGGTGAGTCCTGGGCAGGGAACCTTGCAGGGTCCCAGC
ACTAAGCCTTGCCACTGTGGCAGCAGCGTCAGCCTCATCTTCTCCACAGGTCCAGTGAGT
GCTGGTGTCACTCAGCCCCCCAGATTCCAGGTCCTGAGGACAGGCCAGAGCATGACACTG
AACCGTGCCCAAGATCTGAAACATGACTCTATGTCCTGGTACCGACAAGACTCTGGACAG
GAGCTGAGGCTGATCCATTACTCAGTTGGCAGTGGCATCACTGACAAANGAGACGTCCCC
GACGGCTACAGCGTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|51234535|gb|AAT98142.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|51234535|gb|AAT98142.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               169-324, - strand, RNAz p=0.941421

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               169-324, - strand, RNAz p=0.941421

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               169-675, gnl|bosTau2|chr4 (57826226-57825720)
               

               
               169-675, gnl|Hg17|chr7 (141644601-141645111)
               

               
               169-675, gnl|Mm7|chr6 (41046973-41047451)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               169-675, gnl|bosTau2|chr4 (57826226-57825720)
               

               
               169-675, gnl|Hg17|chr7 (141644601-141645111)
               

               
               169-675, gnl|Mm7|chr6 (41046973-41047451)

	169-675, gnl\|bosTau2\|chr4 (57826226-57825720)
	169-675, gnl\|Hg17\|chr7 (141644601-141645111)
	169-675, gnl\|Mm7\|chr6 (41046973-41047451)