Non-Coding RNA Search

Thy1-THY010047C08

Sequence:


               
               CCGtggcctcgctctgtgggttaagggtctggcatggctatgagctgccatgtgggttgt
gaatgtgtcttagatctggcgttgctgtggctgtggcgtaggacggcggctatggctccg
atttgacccgtagcctggcaacctccatatgccaggtgcggcccTAAAAAGACCAAAATA
AAATAAAATAAAAGGCCTCTGTTGGACTAAAAGGATATTTTCAGTTTCAGATGGCACCGA
CCACACCCCCCTATTTCCCCAGGAAAGTTTCAGCTATCGGAAACTCTCAGGAAAGGAGCT
GGGTGTTCCTGATAAGGAAGTTTTAACCAAATCATGTACATTTTTCTAGAGTGTTTTCTA
GAATAGTAGCTAACATGGTGGGGGGGGGGAGGTTTGCCTTGTTCTAGAAACTTTGTTAAA
GGTTTTCTGAACGTCTCATTTAATCCTAAGAAAAAAGAAATACTTCCCTGCCTTGATTTC
CTGAGAGATCTTTGTACATATCAGCTGTTACGAGTCTTCTCCCTCTGGATGTCAGCTCTG
TGAGAATGTCGTTCTCATTTAGCTTACCACTATTTATTGAGGGATTATTATGTGCCAGAT
ATGCGGCAATGAGTAAAAACAAACTTCCTGCCTTCTGCATGGGAGGACCCTGACAAATAA
TGTTTAAGTATACAACTAGAATATAACAGCAGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGtggcctcgctctgtgggttaagggtctggcatggctatgagctgccatgtgggttgt
gaatgtgtcttagatctggcgttgctgtggctgtggcgtaggacggcggctatggctccg
atttgacccgtagcctggcaacctccatatgccaggtgcggcccTAAAAAGACCAAAATA
AAATAAAATAAAAGGCCTCTGTTGGACTAAAAGGATATTTTCAGTTTCAGATGGCACCGA
CCACACCCCCCTATTTCCCCAGGAAAGTTTCAGCTATCGGAAACTCTCAGGAAAGGAGCT
GGGTGTTCCTGATAAGGAAGTTTTAACCAAATCATGTACATTTTTCTAGAGTGTTTTCTA
GAATAGTAGCTAACATGGTGGGGGGGGGGAGGTTTGCCTTGTTCTAGAAACTTTGTTAAA
GGTTTTCTGAACGTCTCATTTAATCCTAAGAAAAAAGAAATACTTCCCTGCCTTGATTTC
CTGAGAGATCTTTGTACATATCAGCTGTTACGAGTCTTCTCCCTCTGGATGTCAGCTCTG
TGAGAATGTCGTTCTCATTTAGCTTACCACTATTTATTGAGGGATTATTATGTGCCAGAT
ATGCGGCAATGAGTAAAAACAAACTTCCTGCCTTCTGCATGGGAGGACCCTGACAAATAA
TGTTTAAGTATACAACTAGAATATAACAGCAGGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               270-375, - strand, RNAz p=0.534047

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               270-375, - strand, RNAz p=0.534047

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               259-601, gnl|bosTau2|chr19 (43494079-43493745)
               

               
               259-601, gnl|Hg17|chr17 (62858572-62859457)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               259-601, gnl|bosTau2|chr19 (43494079-43493745)
               

               
               259-601, gnl|Hg17|chr17 (62858572-62859457)

	259-601, gnl\|bosTau2\|chr19 (43494079-43493745)
	259-601, gnl\|Hg17\|chr17 (62858572-62859457)