Non-Coding RNA Search

Thy1-THY010049F02

Sequence:


               
               TTATTATGCCTTTTTTTTGGTGTGTTTGAATTCTTAAATTATTATTATTTTTTTGTCTTC
ACAGTCACAGACTCGCAGAACCCCCAGTCTTTCGAGTCTCAATTCCCAGGATTCCAGTAT
TGAAATTTCAAAGCTCACTGATAAGGTGCAGGCCGAGTATAGAGATGCCTATAGAGAGTA
TATTGCTCAGATGTCTCAGTTAGAGGGGGGCACAGGGTCTGCAACAGTGAGCGGCAGGTC
TTCTCCGCATGGCACGTACTATATGGGCCCGAGTTCATCAGGGGGCTCCATCCACTCTAA
CCTGGAGCCAGAAAAAGGGAAGGATAGCGAGCCAAAGCAAGATGATGGCAGGAAGGCCTT
TCTCCTGAAGAGGGGCGACGTTATAGATTACTCATCGTCAGGCGTCTCCACGAACGACGC
CTCACCCCTGGACCCTATCACTGAAGAAGATGAAAAATCCGATCAGTCGGGCAGTAAGCT
GCTCCCAGGCAAGAAATCCTCCGAAAGGTCCAGTCTCTTCCAGACGGACTTGAAGCTGAA
GGGAGGTGGCCTGCGCTATCAGAAACTTCCCAGTGATGAAGATGAATCTGGGACCGAAGA
GTCAGACAACACCCCTCTGCTCAAAGACGACAAAGACAAAAAGGCCGAGGGGAAAGCAGA
GAGGGTGTTGAAGTCTCCAGAGCACAGCACGGAGCCCATTCGGACCTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTATTATGCCTTTTTTTTGGTGTGTTTGAATTCTTAAATTATTATTATTTTTTTGTCTTC
ACAGTCACAGACTCGCAGAACCCCCAGTCTTTCGAGTCTCAATTCCCAGGATTCCAGTAT
TGAAATTTCAAAGCTCACTGATAAGGTGCAGGCCGAGTATAGAGATGCCTATAGAGAGTA
TATTGCTCAGATGTCTCAGTTAGAGGGGGGCACAGGGTCTGCAACAGTGAGCGGCAGGTC
TTCTCCGCATGGCACGTACTATATGGGCCCGAGTTCATCAGGGGGCTCCATCCACTCTAA
CCTGGAGCCAGAAAAAGGGAAGGATAGCGAGCCAAAGCAAGATGATGGCAGGAAGGCCTT
TCTCCTGAAGAGGGGCGACGTTATAGATTACTCATCGTCAGGCGTCTCCACGAACGACGC
CTCACCCCTGGACCCTATCACTGAAGAAGATGAAAAATCCGATCAGTCGGGCAGTAAGCT
GCTCCCAGGCAAGAAATCCTCCGAAAGGTCCAGTCTCTTCCAGACGGACTTGAAGCTGAA
GGGAGGTGGCCTGCGCTATCAGAAACTTCCCAGTGATGAAGATGAATCTGGGACCGAAGA
GTCAGACAACACCCCTCTGCTCAAAGACGACAAAGACAAAAAGGCCGAGGGGAAAGCAGA
GAGGGTGTTGAAGTCTCCAGAGCACAGCACGGAGCCCATTCGGACCTTC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               310-469, - strand, RNAz p=0.835009

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               310-469, - strand, RNAz p=0.835009

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-709, gnl|bosTau2|chr11 (69189734-69189015)
               

               
               1-709, gnl|Hg17|chr2 (8822767-8822066)
               

               
               1-709, gnl|Mm7|chr12 (22893024-22893727)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-709, gnl|bosTau2|chr11 (69189734-69189015)
               

               
               1-709, gnl|Hg17|chr2 (8822767-8822066)
               

               
               1-709, gnl|Mm7|chr12 (22893024-22893727)

	1-709, gnl\|bosTau2\|chr11 (69189734-69189015)
	1-709, gnl\|Hg17\|chr2 (8822767-8822066)
	1-709, gnl\|Mm7\|chr12 (22893024-22893727)