Non-Coding RNA Search

Thy1-THY010049G06

Sequence:


               
               ATTTACATTGGCTGTGTTGTAAGGGTGTGTCTAACTCAGAAAATACTTTTAAATAAAACA
AGATTTCCCAGCTTCTAGCTTGGGAAGAATGAACTTACATTTAAAAAAAAAATCTCAGCT
CATGTTCCAGTACAGAAGCAAAGAGTTTATTAGTAAGACATATTTAAATATTTCACTTGA
GATTACATACTAACATTCTTATCACCATTGCCACCCCCATACCCCCACCACCTAGCCATT
CACCTAGGTTTCTATTGCTTTGACTTTTATGGGGTTTGTGTATAGAGGCAAACCTAAGAA
CTTTGCCCCTCTGATACAACTTTGCAATCATTTATTGTGTGGCTGCTTTGTGCAAAGCTC
TATGGGAGTCCTCATGGAAGATACAAAGGTTTCAGATTGCTTCTGCCTTTGAGGACAGCC
TGGCTTAATGGGAGGAGTAGACACATATGTAACTGCTCCCAGGCAGGTGATGACAAGGGT
CATAATACAGTGCAGACAGAGTCAGAATTCCCTGTGTAAACATCACTCTGAGACTGAGCC
ACATACATGGACTTGCCACATTTCTTTTCTGAATTGAATGTTTAACTCTTAACTTTCCTA
CTTTGGCTTAGAATGTGTTTTCTTCAAAGATTCTTGACTTAATAATGTAATATGATAATT
AAGATTTAACAGGATTTAACTGAAAAATGGATGGAATCACATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTACATTGGCTGTGTTGTAAGGGTGTGTCTAACTCAGAAAATACTTTTAAATAAAACA
AGATTTCCCAGCTTCTAGCTTGGGAAGAATGAACTTACATTTAAAAAAAAAATCTCAGCT
CATGTTCCAGTACAGAAGCAAAGAGTTTATTAGTAAGACATATTTAAATATTTCACTTGA
GATTACATACTAACATTCTTATCACCATTGCCACCCCCATACCCCCACCACCTAGCCATT
CACCTAGGTTTCTATTGCTTTGACTTTTATGGGGTTTGTGTATAGAGGCAAACCTAAGAA
CTTTGCCCCTCTGATACAACTTTGCAATCATTTATTGTGTGGCTGCTTTGTGCAAAGCTC
TATGGGAGTCCTCATGGAAGATACAAAGGTTTCAGATTGCTTCTGCCTTTGAGGACAGCC
TGGCTTAATGGGAGGAGTAGACACATATGTAACTGCTCCCAGGCAGGTGATGACAAGGGT
CATAATACAGTGCAGACAGAGTCAGAATTCCCTGTGTAAACATCACTCTGAGACTGAGCC
ACATACATGGACTTGCCACATTTCTTTTCTGAATTGAATGTTTAACTCTTAACTTTCCTA
CTTTGGCTTAGAATGTGTTTTCTTCAAAGATTCTTGACTTAATAATGTAATATGATAATT
AAGATTTAACAGGATTTAACTGAAAAATGGATGGAATCACATT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               40-155, + strand, RNAz p=0.931627

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-155, + strand, RNAz p=0.931627

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-661, gnl|bosTau2|chr4 (3345809-3345161)
               

               
               1-661, gnl|Hg17|chr7 (7575078-7575745)
               

               
               1-661, gnl|Mm7|chr6 (8302395-8303000)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-661, gnl|bosTau2|chr4 (3345809-3345161)
               

               
               1-661, gnl|Hg17|chr7 (7575078-7575745)
               

               
               1-661, gnl|Mm7|chr6 (8302395-8303000)

	1-661, gnl\|bosTau2\|chr4 (3345809-3345161)
	1-661, gnl\|Hg17\|chr7 (7575078-7575745)
	1-661, gnl\|Mm7\|chr6 (8302395-8303000)