Non-Coding RNA Search

Thy1-THY010049G11

Sequence:


               
               CAGAGCATGGAGGGAGCGGGCCTGAGGTCTGGAGCCGCGGAAGAGCGGGATGAAAGGAAG
CCGTAATTACGGGATCCGCGGGAGGCTGGAGGGAGGCCGCGGCGTGCTGATTAATAACGC
CCTCCGCCGGCCGCCGAGGGGGGAGCGCGGCCGGCCCCCCCTCTTAAGTCCTGCTGTTCG
GAGCGTTTGGCCAGCGGGGACCCGATCGATCGGGGTCTGTTCAGAAGAACCCCGGACGGG
GCGGGTTCTGGAAAAGCGTCCGCCGTGCCTCCGGCCCGGCGCGCCCTTCGGAGTGGATTT
GTCGTCTTCGCTTTTTTTTTTTTTATATAAGCTTTGTGCTGCTGCTGGCCGTGAGAGGCC
TGGGCAGGGAAGAAAACCCAGGGTTCAGGAAGGACACCAGACTTTGGTAGATGGACAGTT
AAGGCGAGGGCCTCCCTGGGCCGTCCTGGGGCCGGAGGTCATTGCTTCTTAGACTGTGGG
CATCCGTGCGACGAGGGGCCAGGTTGGTTTGTGGGTACCGTTGGCCTGGCAGCGTTCCCT
CTCCCCCTGCCCTCGGCCTCGGGCACAGGGCAGGGGCTCCCACCTCCCCGTGTCTGGCTG
TGGCAGCTGTTTTCTGCTGGGGGGTCGAGCAGGCAGGCGATGGTGGTGGCAGGAGGCGCC
TGTCCAGGACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGAGCATGGAGGGAGCGGGCCTGAGGTCTGGAGCCGCGGAAGAGCGGGATGAAAGGAAG
CCGTAATTACGGGATCCGCGGGAGGCTGGAGGGAGGCCGCGGCGTGCTGATTAATAACGC
CCTCCGCCGGCCGCCGAGGGGGGAGCGCGGCCGGCCCCCCCTCTTAAGTCCTGCTGTTCG
GAGCGTTTGGCCAGCGGGGACCCGATCGATCGGGGTCTGTTCAGAAGAACCCCGGACGGG
GCGGGTTCTGGAAAAGCGTCCGCCGTGCCTCCGGCCCGGCGCGCCCTTCGGAGTGGATTT
GTCGTCTTCGCTTTTTTTTTTTTTATATAAGCTTTGTGCTGCTGCTGGCCGTGAGAGGCC
TGGGCAGGGAAGAAAACCCAGGGTTCAGGAAGGACACCAGACTTTGGTAGATGGACAGTT
AAGGCGAGGGCCTCCCTGGGCCGTCCTGGGGCCGGAGGTCATTGCTTCTTAGACTGTGGG
CATCCGTGCGACGAGGGGCCAGGTTGGTTTGTGGGTACCGTTGGCCTGGCAGCGTTCCCT
CTCCCCCTGCCCTCGGCCTCGGGCACAGGGCAGGGGCTCCCACCTCCCCGTGTCTGGCTG
TGGCAGCTGTTTTCTGCTGGGGGGTCGAGCAGGCAGGCGATGGTGGTGGCAGGAGGCGCC
TGTCCAGGACT

Predicted RNA structure(s): 2 entry(ies)

More info

Predicted RNA structure(s): 2 entry(ies)

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               293-385, - strand, RNAz p=0.973043
               

               
               542-646, + strand, RNAz p=0.740687

Predicted RNA structure(s): 2 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               293-385, - strand, RNAz p=0.973043
               

               
               542-646, + strand, RNAz p=0.740687

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               140-646, gnl|bosTau2|chr18 (7900450-7900938)
               

               
               140-646, gnl|Hg17|chr16 (84217979-84218635)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               140-646, gnl|bosTau2|chr18 (7900450-7900938)
               

               
               140-646, gnl|Hg17|chr16 (84217979-84218635)

	293-385, - strand, RNAz p=0.973043
	542-646, + strand, RNAz p=0.740687

	140-646, gnl\|bosTau2\|chr18 (7900450-7900938)
	140-646, gnl\|Hg17\|chr16 (84217979-84218635)