Non-Coding RNA Search

Thy1-THY010052A02

Sequence:


               
               TACATCTTAAAACTGAAGTTGAGAAAAATTATATGAGGCTCAAGAATCACAATGTCATGT
GTGCCCCAAGTTTTTATATGAAAAGCTTTCCTTTTCTAATCGCATCATATTCGAGAGGCT
TTCATTGTGACAATGAGCCAGGCTAGCGTTTTCAAGCTTAGTGCCCTCCTAAAATATAAA
ATCCAAACCACACCCGGTATCTGAGACATAACCTAGCAGCACATAAATGTGTAATACCGT
TTCAGGAGAAGCTTAGAAATTTACAATAAATGCTGGCTGGTGGCGGCAGAGTGGCCCACA
TCGAGTATTAGCGCAGGCTTCCCCAACGCAGTCTGCAGTGCACCCGCACACATCGTTTTA
ATGCCATCTTTATCTGCTACGCGATGCATGAAATCTACTTTCAGTTTTAGAACTGCCAGC
GACCTTTGACCCCTTTAGTGGAGACACAATGTGACCTTTCTATTGTCATCGGCTTTCATT
CTCCTGAAAATTCTATGAATTTTTATTACAAGTTTTTTTTAAGCCAAGCTGAGGCTTCAA
CAAATTACTTGACGCAGATGAGATGAAGTTGTTGGAGTGGGTTAGGTAAGTTTTACAGCC
CGCGTGTGTGCCGCCGAGGAGCCCAGCCTCTGTCCTGCAATGTCATACGCCAGTAACTGC
TGAGCCTACTATTGGATAAATACATCATTTTATGGAACATTGATTGTTCTATAAACCCAA
TGGAGTATTATGCTCTATGATCAAACCATTTAGATTGTGTGTAGAGCACAGAAAATGCCA
TATTCAGGATGGTACTAAAAGTGCCATTTGTGTATTTTATGGATGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACATCTTAAAACTGAAGTTGAGAAAAATTATATGAGGCTCAAGAATCACAATGTCATGT
GTGCCCCAAGTTTTTATATGAAAAGCTTTCCTTTTCTAATCGCATCATATTCGAGAGGCT
TTCATTGTGACAATGAGCCAGGCTAGCGTTTTCAAGCTTAGTGCCCTCCTAAAATATAAA
ATCCAAACCACACCCGGTATCTGAGACATAACCTAGCAGCACATAAATGTGTAATACCGT
TTCAGGAGAAGCTTAGAAATTTACAATAAATGCTGGCTGGTGGCGGCAGAGTGGCCCACA
TCGAGTATTAGCGCAGGCTTCCCCAACGCAGTCTGCAGTGCACCCGCACACATCGTTTTA
ATGCCATCTTTATCTGCTACGCGATGCATGAAATCTACTTTCAGTTTTAGAACTGCCAGC
GACCTTTGACCCCTTTAGTGGAGACACAATGTGACCTTTCTATTGTCATCGGCTTTCATT
CTCCTGAAAATTCTATGAATTTTTATTACAAGTTTTTTTTAAGCCAAGCTGAGGCTTCAA
CAAATTACTTGACGCAGATGAGATGAAGTTGTTGGAGTGGGTTAGGTAAGTTTTACAGCC
CGCGTGTGTGCCGCCGAGGAGCCCAGCCTCTGTCCTGCAATGTCATACGCCAGTAACTGC
TGAGCCTACTATTGGATAAATACATCATTTTATGGAACATTGATTGTTCTATAAACCCAA
TGGAGTATTATGCTCTATGATCAAACCATTTAGATTGTGTGTAGAGCACAGAAAATGCCA
TATTCAGGATGGTACTAAAAGTGCCATTTGTGTATTTTATGGATGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               633-826, + strand, RNAz p=0.944343

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               633-826, + strand, RNAz p=0.944343

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-826, gnl|bosTau2|chr24 (3725619-3724805)
               

               
               2-826, gnl|Hg17|chr18 (70897916-70898739)
               

               
               2-826, gnl|Mm7|chr18 (84565224-84564402)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-826, gnl|bosTau2|chr24 (3725619-3724805)
               

               
               2-826, gnl|Hg17|chr18 (70897916-70898739)
               

               
               2-826, gnl|Mm7|chr18 (84565224-84564402)

	2-826, gnl\|bosTau2\|chr24 (3725619-3724805)
	2-826, gnl\|Hg17\|chr18 (70897916-70898739)
	2-826, gnl\|Mm7\|chr18 (84565224-84564402)