Non-Coding RNA Search

Thy1-THY010065F12

Sequence:


               
               ATAAATTTAGTCTGGGTTTGAATAGAAGGCCAGCATTGATTGGATTTATTAAACCAAAGC
AGAGAGAGGCCTATCTGTATGAATTCTATGGCTTGGATACCAAATAAGTTTGGTTGATGA
TCAGAGGTGTAAGCCTACTCATTTCTGGTCAAGTACTCTAAGTTTTGATGTAAGGCAGTA
TGGAATGATAATAAAGCAGGAAATGTTAGCCATTTGCCAAATGCAACCTGGATCATTTAC
CCTTGAGCCTGCCCTTTAGGGCCATGTTTGCACTCCCGGAAGTTCACCCAGAGCTCCATT
TGGAAGGAATCAGTGCTTGTGAGGAAGGGAGCTGGGCCTCAGACCTCTCTACCTCAGCAA
CCAACCATAGCCCTCCCTTTCCCTCACACAGACAGCTTCTTTCTTCAGAGATTCTCGAAG
ACACATGAGAAAGTCTATGATGGAAATTATAAATATACAGGAagttcctgttgtggcaca
gcggaaatgaacccgactaatattgaatatgcgggttcaatccctggtcttgctcagtgt
cttggggatccaccgttgatgtgagctctggtgtaagtcgcagacgcaacttggatcctg
agttgctgtggctatggtatgggccggcagctatagctccgattagactccttgtctggg
aactttcatatgtcacaggtgcAGTCCTAAAAAAAAAAAAAAAAAAAAGAAGAAAAAGAA
ATTATAAATATATGGCTTGTAATTCTCAAAATGCCATTTGAATTTGATTTTAATGAAATT
AGATTTGGAAGAGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATAAATTTAGTCTGGGTTTGAATAGAAGGCCAGCATTGATTGGATTTATTAAACCAAAGC
AGAGAGAGGCCTATCTGTATGAATTCTATGGCTTGGATACCAAATAAGTTTGGTTGATGA
TCAGAGGTGTAAGCCTACTCATTTCTGGTCAAGTACTCTAAGTTTTGATGTAAGGCAGTA
TGGAATGATAATAAAGCAGGAAATGTTAGCCATTTGCCAAATGCAACCTGGATCATTTAC
CCTTGAGCCTGCCCTTTAGGGCCATGTTTGCACTCCCGGAAGTTCACCCAGAGCTCCATT
TGGAAGGAATCAGTGCTTGTGAGGAAGGGAGCTGGGCCTCAGACCTCTCTACCTCAGCAA
CCAACCATAGCCCTCCCTTTCCCTCACACAGACAGCTTCTTTCTTCAGAGATTCTCGAAG
ACACATGAGAAAGTCTATGATGGAAATTATAAATATACAGGAagttcctgttgtggcaca
gcggaaatgaacccgactaatattgaatatgcgggttcaatccctggtcttgctcagtgt
cttggggatccaccgttgatgtgagctctggtgtaagtcgcagacgcaacttggatcctg
agttgctgtggctatggtatgggccggcagctatagctccgattagactccttgtctggg
aactttcatatgtcacaggtgcAGTCCTAAAAAAAAAAAAAAAAAAAAGAAGAAAAAGAA
ATTATAAATATATGGCTTGTAATTCTCAAAATGCCATTTGAATTTGATTTTAATGAAATT
AGATTTGGAAGAGGA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               38-153, + strand, RNAz p=0.581882

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               38-153, + strand, RNAz p=0.581882

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               3-451, gnl|bosTau2|chr18 (14758695-14758253)
               

               
               3-451, gnl|Hg17|chr16 (66806041-66806479)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-451, gnl|bosTau2|chr18 (14758695-14758253)
               

               
               3-451, gnl|Hg17|chr16 (66806041-66806479)

	3-451, gnl\|bosTau2\|chr18 (14758695-14758253)
	3-451, gnl\|Hg17\|chr16 (66806041-66806479)