Non-Coding RNA Search

Thy1-THY010066F06

Sequence:


               
               ATTTAAAAGTGATTCATCTTAACTGCACATTTATGTTCCAGAGACAAAGAGTTCTGGGAA
GTCAAGAAATAATGATTAAGAGAATAGTGGGATTGATTTATGAGTGAAAGAAGCTGGTCA
TTTATAGCTTGTCTAATGATGGGCATATTTAGGAGGGAAGACAATAGTTACTGTTCATAC
ATTTTGAGATTATTCAGGCAAAGAGAAAAATTGTTTTGGGCAGCTAAGAGATTGCTTCCA
AAATGATACAAAAAAAGGATAATTTAGAAAACAAATTAGGAAAAGTAGAAAAAATATACA
TATATATACTTTACATGGGAAACCGTTAGAAAGCAGAATCATCTCTCCAGAGAGCTAGTG
GGTGAGATAAACTAGCTGTCTCTAGTTTCTGTAATTCATGGCAGATACTTAGGAACAGGT
TACATAAGAGGTTTCTGGGAATGGTTTAAAACAAAGTCTTGTAAAATGCATAAGGTCAGG
CTGAATGACCTAGGTGGTACATTCTGGCTCTGTCAGATCCTGTGATAGCTTGTGGCATTC
TGCTGCTCAGCACTAATGTACCGTGAGGATTATTTACTGGCAGAGTCAGTGAGCCTTTAC
TTGGTTGATGATCAGAATTATTTGAAAAATAATAATTGGGATTAAAATATATTTGTTTTG
GTCCAGTATCTTCTTCCTTTTCCTTGCCCCACTTACCTTCATTTTTTCACCAAAGTAAGA
GTTTTTACTTGGTTAAATATTCTGTTTGCTTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTAAAAGTGATTCATCTTAACTGCACATTTATGTTCCAGAGACAAAGAGTTCTGGGAA
GTCAAGAAATAATGATTAAGAGAATAGTGGGATTGATTTATGAGTGAAAGAAGCTGGTCA
TTTATAGCTTGTCTAATGATGGGCATATTTAGGAGGGAAGACAATAGTTACTGTTCATAC
ATTTTGAGATTATTCAGGCAAAGAGAAAAATTGTTTTGGGCAGCTAAGAGATTGCTTCCA
AAATGATACAAAAAAAGGATAATTTAGAAAACAAATTAGGAAAAGTAGAAAAAATATACA
TATATATACTTTACATGGGAAACCGTTAGAAAGCAGAATCATCTCTCCAGAGAGCTAGTG
GGTGAGATAAACTAGCTGTCTCTAGTTTCTGTAATTCATGGCAGATACTTAGGAACAGGT
TACATAAGAGGTTTCTGGGAATGGTTTAAAACAAAGTCTTGTAAAATGCATAAGGTCAGG
CTGAATGACCTAGGTGGTACATTCTGGCTCTGTCAGATCCTGTGATAGCTTGTGGCATTC
TGCTGCTCAGCACTAATGTACCGTGAGGATTATTTACTGGCAGAGTCAGTGAGCCTTTAC
TTGGTTGATGATCAGAATTATTTGAAAAATAATAATTGGGATTAAAATATATTTGTTTTG
GTCCAGTATCTTCTTCCTTTTCCTTGCCCCACTTACCTTCATTTTTTCACCAAAGTAAGA
GTTTTTACTTGGTTAAATATTCTGTTTGCTTTTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               284-442, + strand, RNAz p=0.660087

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               284-442, + strand, RNAz p=0.660087

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               16-728, gnl|bosTau2|chr24 (41570275-41570984)
               

               
               16-728, gnl|Hg17|chr18 (52530071-52530769)
               

               
               16-728, gnl|Mm7|chr18 (64135724-64136413)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               16-728, gnl|bosTau2|chr24 (41570275-41570984)
               

               
               16-728, gnl|Hg17|chr18 (52530071-52530769)
               

               
               16-728, gnl|Mm7|chr18 (64135724-64136413)

	16-728, gnl\|bosTau2\|chr24 (41570275-41570984)
	16-728, gnl\|Hg17\|chr18 (52530071-52530769)
	16-728, gnl\|Mm7\|chr18 (64135724-64136413)