Non-Coding RNA Search

Thy1-THY010067H04

Sequence:


               
               AAGTAGGACCAAACCTTATGAAATTGCACTCAAGTTGGAATACAGTGGTTCCTTTTATGG
GGGGGTGATTGGTTCCAGGACAACACCTCCCTACCCAGGAATACCAAAATATTTGGAACC
CCAAATCCCTTTTATAAAATGGCAAAGTATTTGCATATAACTCATCCTGCCACATATATT
GAATCAACCCTAGATTACTTGTAACCCCCAACACAATGTAAATGTTATGGGAATAGTTGT
AAATACAATTCAAATACTATGGAAATGGTTGCCAGTGCAGCAAATTCAAGCTTTGCTTTT
TGCAACTTTCTGGAACTTTTTTTCCCCACATACACAGATGTGGAACCCTCAGACATGAAA
GGCCAACCGTGTTCTGGAAAAACTGAAAAGAAGCCAAGGAGCGACCCAGGCTCTTCTCCC
TACTACCTCCCCACAGGGGGAGCCTGAACACAGGTCAGGTCAGGTTTAGGAATTGGGAAG
GGAGGCTGAGAGTCTCTAGCTCAGCCACACTTATCCCAGGTGGCACAGCTGAGGCCCCTG
GTCACCCCACCAGAGCTGTTAGGAATAAAGAGCAGTGTCAGCCAGAGGCAATCTTCTAGC
ACCAATACTCAAGTTCTCTGCAGCTGAGCTTCACCTTTTCAATTAGAGAGATGACAGTGG
TCCTTGGAATATCCACAAGACTGCTTCTGTGAACCTTAGGAGGCCAGATGTGAAACTCCC
TCCACCCCCGAGATAGGGGTCAACAAGCAAGGCCTGCAGCTAANACGTGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGTAGGACCAAACCTTATGAAATTGCACTCAAGTTGGAATACAGTGGTTCCTTTTATGG
GGGGGTGATTGGTTCCAGGACAACACCTCCCTACCCAGGAATACCAAAATATTTGGAACC
CCAAATCCCTTTTATAAAATGGCAAAGTATTTGCATATAACTCATCCTGCCACATATATT
GAATCAACCCTAGATTACTTGTAACCCCCAACACAATGTAAATGTTATGGGAATAGTTGT
AAATACAATTCAAATACTATGGAAATGGTTGCCAGTGCAGCAAATTCAAGCTTTGCTTTT
TGCAACTTTCTGGAACTTTTTTTCCCCACATACACAGATGTGGAACCCTCAGACATGAAA
GGCCAACCGTGTTCTGGAAAAACTGAAAAGAAGCCAAGGAGCGACCCAGGCTCTTCTCCC
TACTACCTCCCCACAGGGGGAGCCTGAACACAGGTCAGGTCAGGTTTAGGAATTGGGAAG
GGAGGCTGAGAGTCTCTAGCTCAGCCACACTTATCCCAGGTGGCACAGCTGAGGCCCCTG
GTCACCCCACCAGAGCTGTTAGGAATAAAGAGCAGTGTCAGCCAGAGGCAATCTTCTAGC
ACCAATACTCAAGTTCTCTGCAGCTGAGCTTCACCTTTTCAATTAGAGAGATGACAGTGG
TCCTTGGAATATCCACAAGACTGCTTCTGTGAACCTTAGGAGGCCAGATGTGAAACTCCC
TCCACCCCCGAGATAGGGGTCAACAAGCAAGGCCTGCAGCTAANACGTGGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               350-456, - strand, RNAz p=0.999557

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               350-456, - strand, RNAz p=0.999557

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               311-766, gnl|bosTau2|chr8 (26096376-26096832)
               

               
               311-766, gnl|Hg17|chr9 (74928881-74928482)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               311-766, gnl|bosTau2|chr8 (26096376-26096832)
               

               
               311-766, gnl|Hg17|chr9 (74928881-74928482)

	311-766, gnl\|bosTau2\|chr8 (26096376-26096832)
	311-766, gnl\|Hg17\|chr9 (74928881-74928482)