Non-Coding RNA Search

Thy1-THY010067H09

Sequence:


               
               AGTCCAGGCAATGATGGCGGCGGCTGTGGCGACCGCTGCGGCGTCCTCCCCGGCTCCCGC
TGCCGGCGCGGAAGGCGCCTCTTCGGTGCACTGGTTCCGCAAGGGGCTGCGGCTCCACGA
CAACCCGGCGCTGCTGGCGGCGGTTCGCGGGGCGCACTGCGTGCGCTGTGTTTACATCCT
CGACCCTTGGTTCGCGGCCTCCTCTTCAGTCGGGATCAACCGGTGGAGGTGAGGGGGCCC
CGGGCGGGTTTGCGGGTCCGGGGAGCGCAGTCTAGCCTCTGAGGCACGTACCCTAAGAGG
GGGGAGGCTCTGGCCCCAGTCCCCTCTGCTGAAAGCCCCCGACCTGAAAGAGATGGGGCA
GGGAGGCGCAGCTGAGTCTCCAGTGGGGAGAAGCCGCGACGTGGGTAGCAATTAGTCCCA
TAGTTAGGGCTTGGGTGGGCCAGGGCTCAACCTCTGGCACGGCGCGTTCGCACTGTGTTA
TCCCTTTTGGTCCTCACGACGTCCCCGTGGAACAAAAATCATGATCCTCATTGTACCGAT
GAGACTCTGGAGTCTTAGAGATACAAAGTTGACCTGCCCAAGGACTTGCAGCCGGCGAGT
GGCAGAACAGGGACTCCTGGTCTAGGGTTCTTAGGGTTGTGCTCAGGGAGGGGAGGATGG
GAGCTATTGCGGTGTGAGGGCCGGGACAGGTTTCTGAAATAGCACGGCAGACACCTGCAT
TCTTCAAGAGCGCTCCTGAAGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTCCAGGCAATGATGGCGGCGGCTGTGGCGACCGCTGCGGCGTCCTCCCCGGCTCCCGC
TGCCGGCGCGGAAGGCGCCTCTTCGGTGCACTGGTTCCGCAAGGGGCTGCGGCTCCACGA
CAACCCGGCGCTGCTGGCGGCGGTTCGCGGGGCGCACTGCGTGCGCTGTGTTTACATCCT
CGACCCTTGGTTCGCGGCCTCCTCTTCAGTCGGGATCAACCGGTGGAGGTGAGGGGGCCC
CGGGCGGGTTTGCGGGTCCGGGGAGCGCAGTCTAGCCTCTGAGGCACGTACCCTAAGAGG
GGGGAGGCTCTGGCCCCAGTCCCCTCTGCTGAAAGCCCCCGACCTGAAAGAGATGGGGCA
GGGAGGCGCAGCTGAGTCTCCAGTGGGGAGAAGCCGCGACGTGGGTAGCAATTAGTCCCA
TAGTTAGGGCTTGGGTGGGCCAGGGCTCAACCTCTGGCACGGCGCGTTCGCACTGTGTTA
TCCCTTTTGGTCCTCACGACGTCCCCGTGGAACAAAAATCATGATCCTCATTGTACCGAT
GAGACTCTGGAGTCTTAGAGATACAAAGTTGACCTGCCCAAGGACTTGCAGCCGGCGAGT
GGCAGAACAGGGACTCCTGGTCTAGGGTTCTTAGGGTTGTGCTCAGGGAGGGGAGGATGG
GAGCTATTGCGGTGTGAGGGCCGGGACAGGTTTCTGAAATAGCACGGCAGACACCTGCAT
TCTTCAAGAGCGCTCCTGAAGGT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|15824993|gb|AAL09564.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|15824993|gb|AAL09564.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               270-428, - strand, RNAz p=0.950953

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               270-428, - strand, RNAz p=0.950953

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-728, gnl|bosTau2|chr15 (47670533-47671298)
               

               
               1-728, gnl|Hg17|chr11 (45825605-45826257)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-728, gnl|bosTau2|chr15 (47670533-47671298)
               

               
               1-728, gnl|Hg17|chr11 (45825605-45826257)

	1-728, gnl\|bosTau2\|chr15 (47670533-47671298)
	1-728, gnl\|Hg17\|chr11 (45825605-45826257)