Thy1-THY010068B06
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGATCGCGCTGGCTCAGGCTGAACACGCCCGGCAGTGCGGACTGTTGCCCCAGGCGAGGA TCGTCTGCAGCCCTTGGTCCTTTCCTTGGTCTTTACCGGCAATAACTCTCTCGAAAACGA CTGATCCGCTGCCGGAAAGAGGACCGATATTCAAGACCCCTTCATCTTCCTTCCAGTGGA CATCGAGCCCAGCATCGGCCGCATCCGCGGGTGGCGGTTTTGCCAGGTGTCACATTGAAA AATGTCTAATGGACAAGACCGGGTAGTTGCTCTACTGGACATGGACTGTTTTTTTGTTCA GGTGGAGCAGCGGCAAAATCCTCATCTGAGGAATAAACCTTGTGCAGTTGTGCAGTACAA ATCATGGAAGGGTGGCGGAATAGTTTCAGTAAGTTATGAAGCTCGTGCATTTGGGGTCAC TAAAAGCATGTGGGCAGATGATGCTAAGAAGTTATGTCCAGATCTTCTCCTGGCACAAGT TCTTGAGTCCCGTGGAAAAGCTAACCTCACCAAGTACCGGGAAGCCAGTGCGGAAGTGAT GGAGGTAATGTCTCGTTTTGCCATGATTGAACGGGCCAGCATTGACGAGGCTTCTGTGGA CCTGACCAATGCTGTACGAGAAAGACTGCAAAAGCTCCAAGGTCAGCCTGTCTCAGCAGA CTTGTTGCCAACCACCTACATTGAAGGGTTTCCCCAAGGCCTTACAACAGCAGAAGGGAC TGTTGAGAAAGAGGAGATGCGAAAACAAGGCTTATTGCAATGGCTTGATTCTCTTCAGTC TGATAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGATCGCGCTGGCTCAGGCTGAACACGCCCGGCAGTGCGGACTGTTGCCCCAGGCGAGGA TCGTCTGCAGCCCTTGGTCCTTTCCTTGGTCTTTACCGGCAATAACTCTCTCGAAAACGA CTGATCCGCTGCCGGAAAGAGGACCGATATTCAAGACCCCTTCATCTTCCTTCCAGTGGA CATCGAGCCCAGCATCGGCCGCATCCGCGGGTGGCGGTTTTGCCAGGTGTCACATTGAAA AATGTCTAATGGACAAGACCGGGTAGTTGCTCTACTGGACATGGACTGTTTTTTTGTTCA GGTGGAGCAGCGGCAAAATCCTCATCTGAGGAATAAACCTTGTGCAGTTGTGCAGTACAA ATCATGGAAGGGTGGCGGAATAGTTTCAGTAAGTTATGAAGCTCGTGCATTTGGGGTCAC TAAAAGCATGTGGGCAGATGATGCTAAGAAGTTATGTCCAGATCTTCTCCTGGCACAAGT TCTTGAGTCCCGTGGAAAAGCTAACCTCACCAAGTACCGGGAAGCCAGTGCGGAAGTGAT GGAGGTAATGTCTCGTTTTGCCATGATTGAACGGGCCAGCATTGACGAGGCTTCTGTGGA CCTGACCAATGCTGTACGAGAAAGACTGCAAAAGCTCCAAGGTCAGCCTGTCTCAGCAGA CTTGTTGCCAACCACCTACATTGAAGGGTTTCCCCAAGGCCTTACAACAGCAGAAGGGAC TGTTGAGAAAGAGGAGATGCGAAAACAAGGCTTATTGCAATGGCTTGATTCTCTTCAGTC TGATAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 278-397, + strand, RNAz p=0.728145 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 278-397, + strand, RNAz p=0.728145 |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 228-397, gnl|bosTau2|chr23 (16069439-16069605) | |
| 228-397, gnl|canFam2|chr12 (15045654-15045521) | |
| 228-397, gnl|canFam2|chr12 (15045508-15045688) | |
| 228-397, gnl|danRer3|chr13 (967186-967315) | |
| 228-397, gnl|danRer3|chr13 (967315-967177) | |
| 228-397, gnl|dasNov1|scaffold_24195 (14189-14055) | |
| 228-397, gnl|dasNov1|scaffold_24195 (14043-14218) | |
| 228-397, gnl|echTel1|scaffold_308664 (97759-97637) | |
| 228-397, gnl|echTel1|scaffold_308664 (97604-97796) | |
| 228-397, gnl|fr1|chrUn (266641870-266641736) | |
| 228-397, gnl|fr1|chrUn (266641741-266641886) | |
| 228-397, gnl|galGal2|chr3 (27184088-27183952) | |
| 228-397, gnl|hg17|chr2 (216846918-216847046) | |
| 228-397, gnl|hg17|chr6 (43658019-43658202) | |
| 228-397, gnl|Hg17|chr6 (43658021-43658188) | |
| 228-397, gnl|mm7|chr17 (44328804-44328935) | |
| 228-397, gnl|mm7|chr17 (44328949-44328768) | |
| 228-397, gnl|Mm7|chr17 (44328948-44328780) | |
| 228-397, gnl|monDom2|scaffold_0 (197950073-197949900) | |
| 228-397, gnl|oryCun1|scaffold_117137 (24842-24708) | |
| 228-397, gnl|oryCun1|scaffold_117137 (24699-24869) | |
| 228-397, gnl|panTro1|chr13 (107022719-107022847) | |
| 228-397, gnl|panTro1|chr5 (44256859-44257042) | |
| 228-397, gnl|rheMac2|chr12 (79977608-79977742) | |
| 228-397, gnl|rheMac2|chr12 (79977742-79977603) | |
| 228-397, gnl|rn3|chr9 (10342667-10342536) | |
| 228-397, gnl|rn3|chr9 (10342523-10342693) | |
| 228-397, gnl|tetNig1|chr17 (6476361-6476241) | |
| 228-397, gnl|tetNig1|chr17 (6476223-6476376) | |
| 514-731, gnl|bosTau2|chr23 (16071363-16071580) | |
| 514-731, gnl|Hg17|chr6 (43662987-43663204) | |
| 514-731, gnl|Mm7|chr17 (44323820-44323606) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 228-397, gnl|bosTau2|chr23 (16069439-16069605) | |
| 228-397, gnl|canFam2|chr12 (15045654-15045521) | |
| 228-397, gnl|canFam2|chr12 (15045508-15045688) | |
| 228-397, gnl|danRer3|chr13 (967186-967315) | |
| 228-397, gnl|danRer3|chr13 (967315-967177) | |
| 228-397, gnl|dasNov1|scaffold_24195 (14189-14055) | |
| 228-397, gnl|dasNov1|scaffold_24195 (14043-14218) | |
| 228-397, gnl|echTel1|scaffold_308664 (97759-97637) | |
| 228-397, gnl|echTel1|scaffold_308664 (97604-97796) | |
| 228-397, gnl|fr1|chrUn (266641870-266641736) | |
| 228-397, gnl|fr1|chrUn (266641741-266641886) | |
| 228-397, gnl|galGal2|chr3 (27184088-27183952) | |
| 228-397, gnl|hg17|chr2 (216846918-216847046) | |
| 228-397, gnl|hg17|chr6 (43658019-43658202) | |
| 228-397, gnl|Hg17|chr6 (43658021-43658188) | |
| 228-397, gnl|mm7|chr17 (44328804-44328935) | |
| 228-397, gnl|mm7|chr17 (44328949-44328768) | |
| 228-397, gnl|Mm7|chr17 (44328948-44328780) | |
| 228-397, gnl|monDom2|scaffold_0 (197950073-197949900) | |
| 228-397, gnl|oryCun1|scaffold_117137 (24842-24708) | |
| 228-397, gnl|oryCun1|scaffold_117137 (24699-24869) | |
| 228-397, gnl|panTro1|chr13 (107022719-107022847) | |
| 228-397, gnl|panTro1|chr5 (44256859-44257042) | |
| 228-397, gnl|rheMac2|chr12 (79977608-79977742) | |
| 228-397, gnl|rheMac2|chr12 (79977742-79977603) | |
| 228-397, gnl|rn3|chr9 (10342667-10342536) | |
| 228-397, gnl|rn3|chr9 (10342523-10342693) | |
| 228-397, gnl|tetNig1|chr17 (6476361-6476241) | |
| 228-397, gnl|tetNig1|chr17 (6476223-6476376) | |
| 514-731, gnl|bosTau2|chr23 (16071363-16071580) | |
| 514-731, gnl|Hg17|chr6 (43662987-43663204) | |
| 514-731, gnl|Mm7|chr17 (44323820-44323606) |