Non-Coding RNA Search

Thy1-THY010069D01

Sequence:


               
               ATATCTGTATACATGTGTGTTGTGTGGGTATGATATTTTTTTCTAAGCTTTTTGAAAGTA
AGTTTAGAAAAGAGGCAATGGAGAACAGTCAGGAGGCCATGGCCTTGCTCTGTGGGAGGG
ATGATGGTTTGGTGGCATGAGTGCTGGGAGGAGGTGAGAACTGGGCATCGTGGGAGTGTA
CAGGAGAGACTCCTCATCTGTCCTTTCTGGTCACCAGAAGAGGTTTCATGAAATGATGGG
CAAACTACAACCTAAAGAACAATTGGAATTAGACAGGTAACATGTAAGGTAGCTCCCCAG
GCCAAGGAAAACCAGATTCAGGAGGAGGGCATCAAGTGTTTGAGGAAGCTGATGTGCTTG
TGCGTGTCCAGATCATCCAGGTTAAGGTGAAATAGGAGGAAGAGCTGTTGCCCAAAGGGG
AGAGGCAGATGTTAGAGAGCCTTTTCAGGCAGGTTAAGGAACTGAGAGTTCATCTTAACC
TTCAGCGGGAGGCCATTGGAGGTTTGGAACAAGGTTAGGATATGGTCAGATTTGCAGTTT
TGAATGGTAACTGGTTGAAGAGTGAAGAAAGAATAAGGGGTTTGAAAGGAGGCAAGAGGA
CCCATTGGGAGTCATTGGCCCTGGTCTGTGGGTGAGATCATGCAGTGAGAGTGGAGAGAG
GTGGGTGGAGATCTTTGGAAGGAAGGGTGGACAGCGCAGAGCACCCATAGTGGAAGTGTC
TGGCGGAGGGCTGAGGGAATCCTGGACTTGGGCAGCTAAGAGGATGCCAAGCACTTCCCT
GAGCTCAGGAACTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATATCTGTATACATGTGTGTTGTGTGGGTATGATATTTTTTTCTAAGCTTTTTGAAAGTA
AGTTTAGAAAAGAGGCAATGGAGAACAGTCAGGAGGCCATGGCCTTGCTCTGTGGGAGGG
ATGATGGTTTGGTGGCATGAGTGCTGGGAGGAGGTGAGAACTGGGCATCGTGGGAGTGTA
CAGGAGAGACTCCTCATCTGTCCTTTCTGGTCACCAGAAGAGGTTTCATGAAATGATGGG
CAAACTACAACCTAAAGAACAATTGGAATTAGACAGGTAACATGTAAGGTAGCTCCCCAG
GCCAAGGAAAACCAGATTCAGGAGGAGGGCATCAAGTGTTTGAGGAAGCTGATGTGCTTG
TGCGTGTCCAGATCATCCAGGTTAAGGTGAAATAGGAGGAAGAGCTGTTGCCCAAAGGGG
AGAGGCAGATGTTAGAGAGCCTTTTCAGGCAGGTTAAGGAACTGAGAGTTCATCTTAACC
TTCAGCGGGAGGCCATTGGAGGTTTGGAACAAGGTTAGGATATGGTCAGATTTGCAGTTT
TGAATGGTAACTGGTTGAAGAGTGAAGAAAGAATAAGGGGTTTGAAAGGAGGCAAGAGGA
CCCATTGGGAGTCATTGGCCCTGGTCTGTGGGTGAGATCATGCAGTGAGAGTGGAGAGAG
GTGGGTGGAGATCTTTGGAAGGAAGGGTGGACAGCGCAGAGCACCCATAGTGGAAGTGTC
TGGCGGAGGGCTGAGGGAATCCTGGACTTGGGCAGCTAAGAGGATGCCAAGCACTTCCCT
GAGCTCAGGAACTTA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               1-223, + strand, RNAz p=0.968407

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-223, + strand, RNAz p=0.968407

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               1-310, gnl|bosTau2|chr17 (29322401-29322717)
               

               
               1-310, gnl|Hg17|chr12 (110591697-110592038)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-310, gnl|bosTau2|chr17 (29322401-29322717)
               

               
               1-310, gnl|Hg17|chr12 (110591697-110592038)

	1-310, gnl\|bosTau2\|chr17 (29322401-29322717)
	1-310, gnl\|Hg17\|chr12 (110591697-110592038)