Thy1-THY010074D08
|
AGAAAAGAGGAGAAGAACAACTTGCGGATGGCTTCCTTTAATGACCCCGACTTCCTCAAG
CAGCTGGAGATGTCCATAAAGTATGGGACCCCATTCCTGTTCCATGATGTGGACGAGTAC
ATCGACCCTGTGATTGATAACGTCTTAGAAAAAAACATCAAGGTCTCCCAAGGACGGCAG
TTTATCATACTGGGAGACAAGGAAGTGGACTATGATTCAAATTTCAGACTCTATCTGAAC
ACCAAGCTGGCCAACCCTAGATACAGCCCACCCGTGTTTGGGAAAGCCATGGTGATCAAT
TACACAGTCACGCTGAAAGGCCTGGAGGACCAGCTGCTGAGTGTGCTGGTGGCCTATGAA
AGGCGAGAGCTGGAGGAGCAGAGGGAGCACCTCATCCAGGAGACGAGCGAGAACAAGAAC
CTGCTGAAGGACCTGGAGGACTCCCTCCTGCGGGAACTGGCCACCTCCACAGGGAACATG
CTGGACAATGTGGAGCTGGTGCAGACCCTGGAGGAGACCAAATCCAAAGCCATGGAGGTT
CAGCTGTGAAAAGAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAGGAAAAAAAAGAAA
TCAGGAAAGTCCAGGGATGGCTTCAGACAGGGCTGGATCCAAGACTTCAAACCTATCATT
AGGACTTGGTTTCTCTCCATTGCTGGTCTGGACCTGCTGCTATGTTGGCTTCATTTTCTG
CCTCCCTGTAGAGCCAAGCTCCCCTCATAGTCCCAAGCAGGCTCTAGCCTCATGTCCCTT
GAGGTTCCAGCCGAAAGAGAAAAGTGAGAATCTTTTCCTGTCCCTATCATAAAGGTCCTG
AGAGTCACTTAATTCACATGCTAACCCTCAGCCATTCCTATGGCCTGGTGGTGCT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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AGAAAAGAGGAGAAGAACAACTTGCGGATGGCTTCCTTTAATGACCCCGACTTCCTCAAG
CAGCTGGAGATGTCCATAAAGTATGGGACCCCATTCCTGTTCCATGATGTGGACGAGTAC
ATCGACCCTGTGATTGATAACGTCTTAGAAAAAAACATCAAGGTCTCCCAAGGACGGCAG
TTTATCATACTGGGAGACAAGGAAGTGGACTATGATTCAAATTTCAGACTCTATCTGAAC
ACCAAGCTGGCCAACCCTAGATACAGCCCACCCGTGTTTGGGAAAGCCATGGTGATCAAT
TACACAGTCACGCTGAAAGGCCTGGAGGACCAGCTGCTGAGTGTGCTGGTGGCCTATGAA
AGGCGAGAGCTGGAGGAGCAGAGGGAGCACCTCATCCAGGAGACGAGCGAGAACAAGAAC
CTGCTGAAGGACCTGGAGGACTCCCTCCTGCGGGAACTGGCCACCTCCACAGGGAACATG
CTGGACAATGTGGAGCTGGTGCAGACCCTGGAGGAGACCAAATCCAAAGCCATGGAGGTT
CAGCTGTGAAAAGAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAGGAAAAAAAAGAAA
TCAGGAAAGTCCAGGGATGGCTTCAGACAGGGCTGGATCCAAGACTTCAAACCTATCATT
AGGACTTGGTTTCTCTCCATTGCTGGTCTGGACCTGCTGCTATGTTGGCTTCATTTTCTG
CCTCCCTGTAGAGCCAAGCTCCCCTCATAGTCCCAAGCAGGCTCTAGCCTCATGTCCCTT
GAGGTTCCAGCCGAAAGAGAAAAGTGAGAATCTTTTCCTGTCCCTATCATAAAGGTCCTG
AGAGTCACTTAATTCACATGCTAACCCTCAGCCATTCCTATGGCCTGGTGGTGCT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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21-305, gnl|bosTau2|chr17 (26877476-26877760) |
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21-305, gnl|canFam2|chr26 (8806302-8806052) |
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21-305, gnl|danRer3|chr5 (19810672-19810439) |
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21-305, gnl|dasNov1|scaffold_6988 (24146-23902) |
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21-305, gnl|fr1|chrUn (2029667-2029912) |
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21-305, gnl|galGal2|chr15 (4835330-4835083) |
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21-305, gnl|hg17|chr12 (122925863-122926110) |
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21-305, gnl|Hg17|chr12 (122925877-122926161) |
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21-305, gnl|loxAfr1|scaffold_29017 (1044-797) |
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21-305, gnl|mm7|chr5 (124053356-124053603) |
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21-305, gnl|Mm7|chr5 (124053370-124053654) |
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21-305, gnl|monDom2|scaffold_97 (4422579-4422827) |
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21-305, gnl|panTro1|chr10 (125982373-125982620) |
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21-305, gnl|rheMac2|chr11 (125218798-125219045) |
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21-305, gnl|rn3|chr12 (32804183-32803938) |
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21-305, gnl|tetNig1|chr12 (6602940-6603176) |
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21-305, gnl|xenTro1|scaffold_100 (2373929-2374162) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
21-305, gnl|bosTau2|chr17 (26877476-26877760) |
|
21-305, gnl|canFam2|chr26 (8806302-8806052) |
|
21-305, gnl|danRer3|chr5 (19810672-19810439) |
|
21-305, gnl|dasNov1|scaffold_6988 (24146-23902) |
|
21-305, gnl|fr1|chrUn (2029667-2029912) |
|
21-305, gnl|galGal2|chr15 (4835330-4835083) |
|
21-305, gnl|hg17|chr12 (122925863-122926110) |
|
21-305, gnl|Hg17|chr12 (122925877-122926161) |
|
21-305, gnl|loxAfr1|scaffold_29017 (1044-797) |
|
21-305, gnl|mm7|chr5 (124053356-124053603) |
|
21-305, gnl|Mm7|chr5 (124053370-124053654) |
|
21-305, gnl|monDom2|scaffold_97 (4422579-4422827) |
|
21-305, gnl|panTro1|chr10 (125982373-125982620) |
|
21-305, gnl|rheMac2|chr11 (125218798-125219045) |
|
21-305, gnl|rn3|chr12 (32804183-32803938) |
|
21-305, gnl|tetNig1|chr12 (6602940-6603176) |
|
21-305, gnl|xenTro1|scaffold_100 (2373929-2374162) |
