Non-Coding RNA Search

Thy1-THY010079B09

Sequence:


               
               GATCCAGAAAGATCACTTATAGGGGGGATAAAGCATTTGAAAGGGGTGGGGGAGGCTCGC
TGACTCTCTCTAATCTGGACTTTTATGTACATTAAACTCACACTGCCAGCTGTGGACCAC
CCTGCGGGCTGTAATCTGGGAAGAGATGAGGTGTGGGGTGGCTAGAGGTTGGCCAGGTTG
GCTGGGTTCAAATCTTGGTTTTAACCACTTAGCAGCTGTGTCACTTCAAGCAAGTTTAGA
CAAAACTCCACAGCCTTGATTTCCTTGTCTGCTTAATGGGGCGAATAGCTCCCTCCCCGG
GTGGCTGTGAGGATTAAACTTGATCTTGTGGAAAAAGCAGAGACGTGGGTTGGGTCCCAG
GCATTTGTTTTTAGTATTGTTATTATCGTTTTCTTCCTTTTGGGGTGCACTCCCCATCAA
CATTTTAGGGAATTCAGTCATGTCGCAGCCCTGCAGACCATATGTGCTGTCAGAATTTTG
GAAGATACAGAGGCCATGGAGACTGCTAATGCTAGTCTCTGAACTTCCTGCAACTTGCCA
CAGCATCAGAGGCAGCCGCCAGTGTCAGTGGCTAATCAAAGCTGGTAGCCCCGGGCCATT
CACCAAGACCTTAGGCGTTCCTGATGGGTCTACAGCCAGACGTGAGGGGATCCTTGGGGG
CCCAGANGCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATCCAGAAAGATCACTTATAGGGGGGATAAAGCATTTGAAAGGGGTGGGGGAGGCTCGC
TGACTCTCTCTAATCTGGACTTTTATGTACATTAAACTCACACTGCCAGCTGTGGACCAC
CCTGCGGGCTGTAATCTGGGAAGAGATGAGGTGTGGGGTGGCTAGAGGTTGGCCAGGTTG
GCTGGGTTCAAATCTTGGTTTTAACCACTTAGCAGCTGTGTCACTTCAAGCAAGTTTAGA
CAAAACTCCACAGCCTTGATTTCCTTGTCTGCTTAATGGGGCGAATAGCTCCCTCCCCGG
GTGGCTGTGAGGATTAAACTTGATCTTGTGGAAAAAGCAGAGACGTGGGTTGGGTCCCAG
GCATTTGTTTTTAGTATTGTTATTATCGTTTTCTTCCTTTTGGGGTGCACTCCCCATCAA
CATTTTAGGGAATTCAGTCATGTCGCAGCCCTGCAGACCATATGTGCTGTCAGAATTTTG
GAAGATACAGAGGCCATGGAGACTGCTAATGCTAGTCTCTGAACTTCCTGCAACTTGCCA
CAGCATCAGAGGCAGCCGCCAGTGTCAGTGGCTAATCAAAGCTGGTAGCCCCGGGCCATT
CACCAAGACCTTAGGCGTTCCTGATGGGTCTACAGCCAGACGTGAGGGGATCCTTGGGGG
CCCAGANGCAT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               427-572, - strand, RNAz p=0.979057

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               427-572, - strand, RNAz p=0.979057

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               45-669, gnl|bosTau2|chr13 (25472102-25471467)
               

               
               45-669, gnl|Hg17|chr20 (21649422-21650873)
               

               
               45-669, gnl|Mm7|chr2 (147120588-147121661)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               45-669, gnl|bosTau2|chr13 (25472102-25471467)
               

               
               45-669, gnl|Hg17|chr20 (21649422-21650873)
               

               
               45-669, gnl|Mm7|chr2 (147120588-147121661)

	45-669, gnl\|bosTau2\|chr13 (25472102-25471467)
	45-669, gnl\|Hg17\|chr20 (21649422-21650873)
	45-669, gnl\|Mm7\|chr2 (147120588-147121661)