Non-Coding RNA Search

Thy1-THY010085A11

Sequence:


               
               AAAAAATAAACTGGGCCCAGGCTTTAGAGGGCAGAGTGCTAAGAATTTTGAGCAGAATAA
TTATCTGAATTTAAAAAATTTTTTTTATTGttttgctatttcttgggccgctcccatggc
atgtggagattcccaagctaggggtccaattggagctatagccaccggcctacaccagag
ccacagcaatgcgggatccgagccgcgtctgcaacctacaccacagctcacggcaacgcc
ggatcgttaacccactgagcaagggcagggaccgaacccgcaacctcatggttcctagtc
ggattcgttaaccactgcgccatgacgggaactccTTATCTGAATTTTAGAAAGTGAATT
CTAGTGGCTGTATAGAAGAGGATGAATAGTAGTAGACAGATGCTAAAGGTAGGGAAATCC
CTTTTACAGGTGTTGCTATACTTGAGAGAAGACATGTGGGCCCTGACCTGGGCAGTGGGG
ATGAGAAGGAGAGATATAGATTTAGGCATGTGTTACAAGTAGAATCCACAGTGTTTATCA
GTCTATTGGAGGCTAGGAGGGAAGGAAAGGACAAGAATGTTAGCGATTCCTAGTGTGAGC
AAGTAATGGGATGGTATAATGAATACTAATATAAGAAAAACAGACAGGAATGGGATTTGT
AGGGAAGGTGATACAGTTTCTTTTATACTTTACTCCTGAGGAATTCATGGGGAACCAAGG
AGCCTGAGAGAGGTGGACTAAAGTAGGATCTTTCTCTGTCCATGTACCTTTTTTGAGGTG
CAGTTTTCACCTGAATCGAGTTCTGCAGGAAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAAATAAACTGGGCCCAGGCTTTAGAGGGCAGAGTGCTAAGAATTTTGAGCAGAATAA
TTATCTGAATTTAAAAAATTTTTTTTATTGttttgctatttcttgggccgctcccatggc
atgtggagattcccaagctaggggtccaattggagctatagccaccggcctacaccagag
ccacagcaatgcgggatccgagccgcgtctgcaacctacaccacagctcacggcaacgcc
ggatcgttaacccactgagcaagggcagggaccgaacccgcaacctcatggttcctagtc
ggattcgttaaccactgcgccatgacgggaactccTTATCTGAATTTTAGAAAGTGAATT
CTAGTGGCTGTATAGAAGAGGATGAATAGTAGTAGACAGATGCTAAAGGTAGGGAAATCC
CTTTTACAGGTGTTGCTATACTTGAGAGAAGACATGTGGGCCCTGACCTGGGCAGTGGGG
ATGAGAAGGAGAGATATAGATTTAGGCATGTGTTACAAGTAGAATCCACAGTGTTTATCA
GTCTATTGGAGGCTAGGAGGGAAGGAAAGGACAAGAATGTTAGCGATTCCTAGTGTGAGC
AAGTAATGGGATGGTATAATGAATACTAATATAAGAAAAACAGACAGGAATGGGATTTGT
AGGGAAGGTGATACAGTTTCTTTTATACTTTACTCCTGAGGAATTCATGGGGAACCAAGG
AGCCTGAGAGAGGTGGACTAAAGTAGGATCTTTCTCTGTCCATGTACCTTTTTTGAGGTG
CAGTTTTCACCTGAATCGAGTTCTGCAGGAAGA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               695-813, + strand, RNAz p=0.657129

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               695-813, + strand, RNAz p=0.657129

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               336-813, gnl|bosTau2|chr10 (16449186-16449652)
               

               
               336-813, gnl|Hg17|chr14 (19910075-19909602)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               336-813, gnl|bosTau2|chr10 (16449186-16449652)
               

               
               336-813, gnl|Hg17|chr14 (19910075-19909602)

	336-813, gnl\|bosTau2\|chr10 (16449186-16449652)
	336-813, gnl\|Hg17\|chr14 (19910075-19909602)