Non-Coding RNA Search

Thy1-THY010092H03

Sequence:


               
               ACCACATTTATGTAATCATCACCCAGTCTAAGGCCACATATATCAATCTACAGATAGACT
GATAGATGGAGATACATATGGCATCTAGCCTTCTCATCAATTGTAAATACCAAGAGTATT
TATTTGCATTCATATTTTTAAGAAGTTTGAGAATGAGATTTAATTACGGTAGGACTTAAT
TTGTTATGGAATATTAGCTTCTAAAATAAATTAGTGTTGTTTCCGTGGTTTTCACCTTTT
GTGTATTTTAAGACCTCACCACGCAGCTTCGTAGCCCTCACAGTGAATCTTTTGAAATAC
AGGAGAGGTGAGCATCCCAGAGTCTAGGTGGTAGGGGTGTACTTGGTTGATCCTACACCT
AGATCCATCATTCAGATTTATTGTTCACCCTGAATGAGGCCACCAATACTGCTTTTAAAA
ATTCGATCTGTTAAAAGGAAGAGATTTTTTTAAATGAGAAAAATGCACACAGAGCACACT
AAGCTCTACAGTACAACAAAGTGAGGAAGGAACTAGCTTTAAAGAAACAAATTTTCTTAA
AT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCACATTTATGTAATCATCACCCAGTCTAAGGCCACATATATCAATCTACAGATAGACT
GATAGATGGAGATACATATGGCATCTAGCCTTCTCATCAATTGTAAATACCAAGAGTATT
TATTTGCATTCATATTTTTAAGAAGTTTGAGAATGAGATTTAATTACGGTAGGACTTAAT
TTGTTATGGAATATTAGCTTCTAAAATAAATTAGTGTTGTTTCCGTGGTTTTCACCTTTT
GTGTATTTTAAGACCTCACCACGCAGCTTCGTAGCCCTCACAGTGAATCTTTTGAAATAC
AGGAGAGGTGAGCATCCCAGAGTCTAGGTGGTAGGGGTGTACTTGGTTGATCCTACACCT
AGATCCATCATTCAGATTTATTGTTCACCCTGAATGAGGCCACCAATACTGCTTTTAAAA
ATTCGATCTGTTAAAAGGAAGAGATTTTTTTAAATGAGAAAAATGCACACAGAGCACACT
AAGCTCTACAGTACAACAAAGTGAGGAAGGAACTAGCTTTAAAGAAACAAATTTTCTTAA
AT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               3-94, - strand, RNAz p=0.963807

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               3-94, - strand, RNAz p=0.963807

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               26-108, + strand, RNAmicro p=0.968926

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               26-108, + strand, RNAmicro p=0.968926

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-476, gnl|bosTau2|chr9 (48016287-48015831)
               

               
               3-476, gnl|Hg17|chr6 (144039978-144040448)
               

               
               3-476, gnl|Mm7|chr10 (13025478-13025008)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-476, gnl|bosTau2|chr9 (48016287-48015831)
               

               
               3-476, gnl|Hg17|chr6 (144039978-144040448)
               

               
               3-476, gnl|Mm7|chr10 (13025478-13025008)

	3-476, gnl\|bosTau2\|chr9 (48016287-48015831)
	3-476, gnl\|Hg17\|chr6 (144039978-144040448)
	3-476, gnl\|Mm7\|chr10 (13025478-13025008)