Non-Coding RNA Search

Thy1-THY010094B11

Sequence:


               
               ATTATAAAAAGTACAATGTAACAATTTAATAAGGCTATACATACCTGCATAAAGTTATTT
TGATTTCTTGTATTTCTTTGGCAATTATAGATATTTCATTATCAAGGAATCCTAAGGAAT
TATCAATAATTTTTTTCACATTTCCAGGAAGTTGATACAAAATAGTTTAAAAAACACCAG
ACATATTAAAGGCTTACACAATTTGAATAATACCTTGTCAGAGTCCGCCAAATAGCACAA
GTTCTCATGCATATGACCAGCTGCCAACAAAAACTCCAAGTGAAGTTTTTCAGTGAAAGA
GAGAAAAAAATCATGTTCAAGAACCCCAAGAAAGAAATTACTCTTGATTTGGATGAAAAG
AATCTGGAGTAGAGGAGCTAATGAAAATAATTAACTTCACAGATTTTTTTTAATTTGCTA
TTGTTAGTTAGGGATGCCAGATCAAATTTGAAGAAATGTCACATACTCTAAGAGTCAAAC
ATAACCCATGGAAATGATGCATTGTAGGTTCTGAATCTAGGTTAATATACTTACAATGGC
CATTATCAATCAAGATTTTGCCTATATTTTGGAATTTTGTTTTCCTCTGTGCAGACTTAT
ATCTTCTAAAATATTAAAACTGGAGAGTAAAATAAACAATTATATTTGTATTCAAAGTGG
GGATTTCCTATAAATAAAATTTATTCCATGTGTGAGATGGAAAAAAACAAAGTAATTACT
TGATGGTCAAGTGTAGCCTTCATTAAGATACAAAGATGGTACTTAGCTGATGCCTTTAAG
AACAATTACAACTACNGAAGTTTCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTATAAAAAGTACAATGTAACAATTTAATAAGGCTATACATACCTGCATAAAGTTATTT
TGATTTCTTGTATTTCTTTGGCAATTATAGATATTTCATTATCAAGGAATCCTAAGGAAT
TATCAATAATTTTTTTCACATTTCCAGGAAGTTGATACAAAATAGTTTAAAAAACACCAG
ACATATTAAAGGCTTACACAATTTGAATAATACCTTGTCAGAGTCCGCCAAATAGCACAA
GTTCTCATGCATATGACCAGCTGCCAACAAAAACTCCAAGTGAAGTTTTTCAGTGAAAGA
GAGAAAAAAATCATGTTCAAGAACCCCAAGAAAGAAATTACTCTTGATTTGGATGAAAAG
AATCTGGAGTAGAGGAGCTAATGAAAATAATTAACTTCACAGATTTTTTTTAATTTGCTA
TTGTTAGTTAGGGATGCCAGATCAAATTTGAAGAAATGTCACATACTCTAAGAGTCAAAC
ATAACCCATGGAAATGATGCATTGTAGGTTCTGAATCTAGGTTAATATACTTACAATGGC
CATTATCAATCAAGATTTTGCCTATATTTTGGAATTTTGTTTTCCTCTGTGCAGACTTAT
ATCTTCTAAAATATTAAAACTGGAGAGTAAAATAAACAATTATATTTGTATTCAAAGTGG
GGATTTCCTATAAATAAAATTTATTCCATGTGTGAGATGGAAAAAAACAAAGTAATTACT
TGATGGTCAAGTGTAGCCTTCATTAAGATACAAAGATGGTACTTAGCTGATGCCTTTAAG
AACAATTACAACTACNGAAGTTTCTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               270-389, - strand, RNAz p=0.787927

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               270-389, - strand, RNAz p=0.787927

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-768, gnl|bosTau2|chr26 (3856769-3856005)
               

               
               2-768, gnl|Hg17|chr10 (55249733-55250529)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-768, gnl|bosTau2|chr26 (3856769-3856005)
               

               
               2-768, gnl|Hg17|chr10 (55249733-55250529)

	2-768, gnl\|bosTau2\|chr26 (3856769-3856005)
	2-768, gnl\|Hg17\|chr10 (55249733-55250529)