Non-Coding RNA Search

Thy1-THY010100F11

Sequence:


               
               ATTTCATTTTGTTCCTCCCCCAGCCTCACGGTTTATGTATGAGCTGTTAGGTGACCGAGT
TCTATTTTTAACTGCAAATATGTTCTTTTCAACTGGAATCATATTCTTTAGACACTGCAT
TATGCAAGCTGGCTCCAAAGTTTGCCAGCAGTGCTAAACTCAACTGTGACAATTCCCAGC
CACTGCCACTGAGCCCGCTACAGTGAAGCAAACAGCACGCTTACTTGCTGCAAGATAGAG
CTGCTGTTGTGTCTAATAACTTTGCTACCTGAGGAGAAAGCTATGTCTGGCCACTCCGAT
CAGCTACCCTCCTCTTGTCTCCTGCCTATCCCAGAAAAAATCCTCTGGGCCTTGGGGGAC
GGCATTAAAAAGGCTTCTGTTGAGGAAGGTTAAACTTGAAATTAGTCATAATGAGGTACA
AGCTATGTAATGCTCATTGTGGTGTATCTTCTCAGGCTATGAGCAGGAGAGGACGGTTTC
AATGGAGGGCCTCAAGTCGAGAAGTCATTCTGATGAAGTGTTCCTGCTGAGCCATTCACT
ATTCTAAAGTGAGAAACTTAGACAAGCCCAGTGGTTGGGTCTCATGTTTTTCTGTGGGAT
AATCACAGAGAAGTGTCTTTCCAGAATGGCACAGAGCTGGGATCTTTCCCCCTGCTTTCT
CCTAGAGGACTGGCATCTGGCTTATCCAAAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTCATTTTGTTCCTCCCCCAGCCTCACGGTTTATGTATGAGCTGTTAGGTGACCGAGT
TCTATTTTTAACTGCAAATATGTTCTTTTCAACTGGAATCATATTCTTTAGACACTGCAT
TATGCAAGCTGGCTCCAAAGTTTGCCAGCAGTGCTAAACTCAACTGTGACAATTCCCAGC
CACTGCCACTGAGCCCGCTACAGTGAAGCAAACAGCACGCTTACTTGCTGCAAGATAGAG
CTGCTGTTGTGTCTAATAACTTTGCTACCTGAGGAGAAAGCTATGTCTGGCCACTCCGAT
CAGCTACCCTCCTCTTGTCTCCTGCCTATCCCAGAAAAAATCCTCTGGGCCTTGGGGGAC
GGCATTAAAAAGGCTTCTGTTGAGGAAGGTTAAACTTGAAATTAGTCATAATGAGGTACA
AGCTATGTAATGCTCATTGTGGTGTATCTTCTCAGGCTATGAGCAGGAGAGGACGGTTTC
AATGGAGGGCCTCAAGTCGAGAAGTCATTCTGATGAAGTGTTCCTGCTGAGCCATTCACT
ATTCTAAAGTGAGAAACTTAGACAAGCCCAGTGGTTGGGTCTCATGTTTTTCTGTGGGAT
AATCACAGAGAAGTGTCTTTCCAGAATGGCACAGAGCTGGGATCTTTCCCCCTGCTTTCT
CCTAGAGGACTGGCATCTGGCTTATCCAAAAT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               61-180, - strand, RNAz p=0.579614

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               61-180, - strand, RNAz p=0.579614

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               22-690, gnl|bosTau2|chr4 (23622577-23621899)
               

               
               22-690, gnl|Hg17|chr7 (105374356-105375027)
               

               
               22-690, gnl|Mm7|chr12 (30766269-30765661)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               22-690, gnl|bosTau2|chr4 (23622577-23621899)
               

               
               22-690, gnl|Hg17|chr7 (105374356-105375027)
               

               
               22-690, gnl|Mm7|chr12 (30766269-30765661)

	22-690, gnl\|bosTau2\|chr4 (23622577-23621899)
	22-690, gnl\|Hg17\|chr7 (105374356-105375027)
	22-690, gnl\|Mm7\|chr12 (30766269-30765661)