Non-Coding RNA Search

Thy1-THY010104B03

Sequence:


               
               ACACACACATACACACACACACAAAATCCACTGCCGGAGCATGGCACAGTAAATGTCAGC
TGCTCTGTTTGTGCTACCCCTTCTGGCCACCTGGCTGGTCACCAAGTCCTACATATTCCA
GCTCCTTAATATAGTGGATATAATTTGTTCTGGATCACAGCAGCAGCCCCACTGCCTTCT
CCCACCCACCTGTACCCCCCATGCAGCAGAGCCATCTTTCTGTCCCACTCCTCCTTTCCC
AGAACCAACCCCCAGGCCACCCCGAGGGCTAGCCCCTCCTGGCCCTGTCCCACCTTGCTA
TCAGGATATACCACTCTGTCCTGTAATCCTCCTGGGTTCCTTGAAGGAGGGCTATGTCTG
ATTTATTTCAGGGTCCCAAGACCTACCTCAGCAGAGGCTCAATAAATCCCTAGTAAACTG
ACCTGACTTTGAAGCCCTGGGGCCAAGGGGACCCGGGGTGGTTCTGAAGAAGGCTGGATT
CAAGCCCCACAACCCAATCAGCAGTGAGAAGAGGCTCTGTGTGTGGGGACCTGCCTCACA
GGCACCTGGAACTGGACAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACACACACATACACACACACACAAAATCCACTGCCGGAGCATGGCACAGTAAATGTCAGC
TGCTCTGTTTGTGCTACCCCTTCTGGCCACCTGGCTGGTCACCAAGTCCTACATATTCCA
GCTCCTTAATATAGTGGATATAATTTGTTCTGGATCACAGCAGCAGCCCCACTGCCTTCT
CCCACCCACCTGTACCCCCCATGCAGCAGAGCCATCTTTCTGTCCCACTCCTCCTTTCCC
AGAACCAACCCCCAGGCCACCCCGAGGGCTAGCCCCTCCTGGCCCTGTCCCACCTTGCTA
TCAGGATATACCACTCTGTCCTGTAATCCTCCTGGGTTCCTTGAAGGAGGGCTATGTCTG
ATTTATTTCAGGGTCCCAAGACCTACCTCAGCAGAGGCTCAATAAATCCCTAGTAAACTG
ACCTGACTTTGAAGCCCTGGGGCCAAGGGGACCCGGGGTGGTTCTGAAGAAGGCTGGATT
CAAGCCCCACAACCCAATCAGCAGTGAGAAGAGGCTCTGTGTGTGGGGACCTGCCTCACA
GGCACCTGGAACTGGACAG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               352-470, + strand, RNAz p=0.932081

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               352-470, + strand, RNAz p=0.932081

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               249-559, gnl|bosTau2|chr2 (78182165-78182472)
               

               
               249-559, gnl|Hg17|chr1 (26341782-26342111)
               

               
               249-559, gnl|Mm7|chr4 (133466322-133466059)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               249-559, gnl|bosTau2|chr2 (78182165-78182472)
               

               
               249-559, gnl|Hg17|chr1 (26341782-26342111)
               

               
               249-559, gnl|Mm7|chr4 (133466322-133466059)

	249-559, gnl\|bosTau2\|chr2 (78182165-78182472)
	249-559, gnl\|Hg17\|chr1 (26341782-26342111)
	249-559, gnl\|Mm7\|chr4 (133466322-133466059)