Non-Coding RNA Search

Thy1-THY010111A01

Sequence:


               
               TGGTCAATCAGAAGGCTCCTTGCCTGAAGGGCCTGAACCAGAGACAGAGCAGCCAGGGTT
AGTCAGCCTTGGGGGCGAGGGGAGGAAGCTGGAGCCTTGCACTGCGGGCGCCCCCTGCCC
TGGGCTGGGGCCAGGGCTGGCGGACTGTCAGGAAGGCCACTCACAGTGAGCAGGGCCGTG
CCCTCAGCCCCAGACCGCACCCGCGCACGACAGCTTGCTGGCAGATGGCGCTGCGTCGCT
TTCTCTGTTCCCACACAGTTTGCATTGTCTGCCTGCCAGGAACCTTCCAGTTATTAGCAA
ACGCAGACAGAAAGTGCCGCCAGTATTATCAGCAGTCTACCAGCGCCTTCCCCGCTGCAG
AAACGACAGGACTAAGGGCTGTTCTGGGGCCGCCTCCCCTGCACAGACGCAGAGAGCACC
ACGTGCCACAGGTGGGGACAGGTGTTCAGAGGGCGCCCTGCTGCCAACGATCACAGGAAG
GCATCGCTGCTTTCCTCTGCGTAGAGCCTGCTTGCTGTCTCCAGTCTGAAGGCTGCGCAG
TCCCATCCTGGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGTCAATCAGAAGGCTCCTTGCCTGAAGGGCCTGAACCAGAGACAGAGCAGCCAGGGTT
AGTCAGCCTTGGGGGCGAGGGGAGGAAGCTGGAGCCTTGCACTGCGGGCGCCCCCTGCCC
TGGGCTGGGGCCAGGGCTGGCGGACTGTCAGGAAGGCCACTCACAGTGAGCAGGGCCGTG
CCCTCAGCCCCAGACCGCACCCGCGCACGACAGCTTGCTGGCAGATGGCGCTGCGTCGCT
TTCTCTGTTCCCACACAGTTTGCATTGTCTGCCTGCCAGGAACCTTCCAGTTATTAGCAA
ACGCAGACAGAAAGTGCCGCCAGTATTATCAGCAGTCTACCAGCGCCTTCCCCGCTGCAG
AAACGACAGGACTAAGGGCTGTTCTGGGGCCGCCTCCCCTGCACAGACGCAGAGAGCACC
ACGTGCCACAGGTGGGGACAGGTGTTCAGAGGGCGCCCTGCTGCCAACGATCACAGGAAG
GCATCGCTGCTTTCCTCTGCGTAGAGCCTGCTTGCTGTCTCCAGTCTGAAGGCTGCGCAG
TCCCATCCTGGGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               42-158, + strand, RNAz p=0.744285

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               42-158, + strand, RNAz p=0.744285

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               7-534, gnl|bosTau2|chr18 (7934151-7934684)
               

               
               7-534, gnl|Hg17|chr16 (84265174-84265671)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-534, gnl|bosTau2|chr18 (7934151-7934684)
               

               
               7-534, gnl|Hg17|chr16 (84265174-84265671)

	7-534, gnl\|bosTau2\|chr18 (7934151-7934684)
	7-534, gnl\|Hg17\|chr16 (84265174-84265671)