Non-Coding RNA Search

Thy1-THY010111H09

Sequence:


               
               AATTTGAAAGACTTTGGAAACATATCCAGTTAAATAGCATTACCGTAGGATGTACCAAAA
GAAATGGATACGTTCTCATTGTCCTTGTGGCTGGTTGGCTCCACAGGGAAGAAACTCTAA
ACGATCTCCTGTGTTAATCTAAGACCTGTTGTTCATCAGAGACAGTGGGCTTGCTCACAG
AGAGTCATTACCTTTCACAACTGCCACACGGGCCTTTGTGTGGCCTCTATACAGCTGAGC
CAGCCCCTGTAGCTCTATCCTCATCATAAGATTCGGAGCTAAAGTGTTAGGTCTGGTCAG
TGCTTTTATTGGAACCTATTTTACTTCACTCTGAGACATGTTGAGCCGGGGCTGTAACAG
AATATGAGGAAGCTCTGCCTCAATAGAGCACTCCCACTGGTGGTGGTACAGAGGTACAGA
GAGTTAAGTTCTTTGATGGATAAAACTAGACCTAAAGAATAGTTGGACTAGATGACCACT
GAGTTTTTCCACCTCTCAACCCCTGTAAAAAACGAAACTCCAGTTGCTTCAAGTACCTCA
T

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATTTGAAAGACTTTGGAAACATATCCAGTTAAATAGCATTACCGTAGGATGTACCAAAA
GAAATGGATACGTTCTCATTGTCCTTGTGGCTGGTTGGCTCCACAGGGAAGAAACTCTAA
ACGATCTCCTGTGTTAATCTAAGACCTGTTGTTCATCAGAGACAGTGGGCTTGCTCACAG
AGAGTCATTACCTTTCACAACTGCCACACGGGCCTTTGTGTGGCCTCTATACAGCTGAGC
CAGCCCCTGTAGCTCTATCCTCATCATAAGATTCGGAGCTAAAGTGTTAGGTCTGGTCAG
TGCTTTTATTGGAACCTATTTTACTTCACTCTGAGACATGTTGAGCCGGGGCTGTAACAG
AATATGAGGAAGCTCTGCCTCAATAGAGCACTCCCACTGGTGGTGGTACAGAGGTACAGA
GAGTTAAGTTCTTTGATGGATAAAACTAGACCTAAAGAATAGTTGGACTAGATGACCACT
GAGTTTTTCCACCTCTCAACCCCTGTAAAAAACGAAACTCCAGTTGCTTCAAGTACCTCA
T

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               160-279, - strand, RNAz p=0.607291

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               160-279, - strand, RNAz p=0.607291

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-541, gnl|bosTau2|chr10 (59803864-59803320)
               

               
               1-541, gnl|Hg17|chr14 (72820182-72819690)
               

               
               1-541, gnl|Mm7|chr12 (81796767-81796263)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-541, gnl|bosTau2|chr10 (59803864-59803320)
               

               
               1-541, gnl|Hg17|chr14 (72820182-72819690)
               

               
               1-541, gnl|Mm7|chr12 (81796767-81796263)

	1-541, gnl\|bosTau2\|chr10 (59803864-59803320)
	1-541, gnl\|Hg17\|chr14 (72820182-72819690)
	1-541, gnl\|Mm7\|chr12 (81796767-81796263)