Thy1-THY010112B05
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGTCCGGAATCCTCAGCACGTGGCCTACTGGACTACTGGGTTTTCAGCAAGGCAGCTGCG TAAAGGCGAGAGAACCTCGAAGGGAAATGCTGAGGGGCCCAGAGCCACGGACTGAGATCA CCCCACCCGAGGCCAGAGCCGAGGTCTGCCCGTAGCCGGGATGCTTTCCTGAGCTGCTGG CGCTGCAGCCGGGGACCCGAGACCCGCGCAGCTATTCCAGGAACGGGAAGCCAACACAAC AGGTGCTCAGGAGGTCATCATGCTCAGCCCAGACCCCAGGCCTGCCCCTGGCTTGGCCCG GTGGGCTGAGAGCTACGAGGCCAAGTGCGAGCGCCGGCAGGAGACCCGTGAGAGCCGCCG CCGCCGCCCCAACGTGACCACTTGCCTCCAGGTGGGGAAGGCGCTGAGGACCCAGCAGAG GGAGCAGTTCCAGAAAGCACGACAGCAGCAGTTTTTCAGACTGAGGCACCTGGAGGTGGA GGAAAAGGCCANGCAAAGCGCTCGCAGACCAGGCAGCCAGGTTCCTCCAGGGCAGGACAG GCACCTGACCTCAAGGAGCCCTGGCCTTGGGCCAACAGGATTTTTCCCCTGGAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGTCCGGAATCCTCAGCACGTGGCCTACTGGACTACTGGGTTTTCAGCAAGGCAGCTGCG TAAAGGCGAGAGAACCTCGAAGGGAAATGCTGAGGGGCCCAGAGCCACGGACTGAGATCA CCCCACCCGAGGCCAGAGCCGAGGTCTGCCCGTAGCCGGGATGCTTTCCTGAGCTGCTGG CGCTGCAGCCGGGGACCCGAGACCCGCGCAGCTATTCCAGGAACGGGAAGCCAACACAAC AGGTGCTCAGGAGGTCATCATGCTCAGCCCAGACCCCAGGCCTGCCCCTGGCTTGGCCCG GTGGGCTGAGAGCTACGAGGCCAAGTGCGAGCGCCGGCAGGAGACCCGTGAGAGCCGCCG CCGCCGCCCCAACGTGACCACTTGCCTCCAGGTGGGGAAGGCGCTGAGGACCCAGCAGAG GGAGCAGTTCCAGAAAGCACGACAGCAGCAGTTTTTCAGACTGAGGCACCTGGAGGTGGA GGAAAAGGCCANGCAAAGCGCTCGCAGACCAGGCAGCCAGGTTCCTCCAGGGCAGGACAG GCACCTGACCTCAAGGAGCCCTGGCCTTGGGCCAACAGGATTTTTCCCCTGGAC |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 477-594, - strand, RNAz p=0.998835 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 477-594, - strand, RNAz p=0.998835 |
| Predicted microRNA(s): 1 entry(ies) | More info |
| Predicted microRNA(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
| 485-598, - strand, RNAmicro p=0.99878 |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 42-197, gnl|bosTau2|chr16 (50787642-50787806) | |
| 42-197, gnl|canFam2|chr7 (11378560-11378991) | |
| 42-197, gnl|dasNov1|scaffold_117653 (5020-4591) | |
| 42-197, gnl|hg17|chr1 (206317842-206318262) | |
| 42-197, gnl|Hg17|chr1 (206317860-206318044) | |
| 42-197, gnl|loxAfr1|scaffold_27281 (17821-18262) | |
| 42-197, gnl|mm7|chr1 (192754108-192753723) | |
| 42-197, gnl|Mm7|chr1 (192754091-192753918) | |
| 42-197, gnl|monDom2|scaffold_13 (12756721-12757190) | |
| 42-197, gnl|oryCun1|scaffold_209827 (204533-204952) | |
| 42-197, gnl|panTro1|chr1 (189933372-189933792) | |
| 42-197, gnl|rheMac2|chr1 (160638603-160638178) | |
| 42-197, gnl|rn3|chr13 (109223499-109223137) | |
| 200-594, gnl|bosTau2|chr16 (50791533-50791934) | |
| 200-594, gnl|canFam2|chr7 (11382306-11383209) | |
| 200-594, gnl|dasNov1|scaffold_117653 (1533-636) | |
| 200-594, gnl|echTel1|scaffold_285621 (43138-42317) | |
| 200-594, gnl|hg17|chr1 (206321347-206322296) | |
| 200-594, gnl|Hg17|chr1 (206321720-206322119) | |
| 200-594, gnl|loxAfr1|scaffold_27281 (21233-22112) | |
| 200-594, gnl|mm7|chr1 (192751002-192750134) | |
| 200-594, gnl|Mm7|chr1 (192750698-192750302) | |
| 200-594, gnl|monDom2|scaffold_13 (12761048-12761966) | |
| 200-594, gnl|oryCun1|scaffold_209827 (207987-208850) | |
| 200-594, gnl|panTro1|chr1 (189936917-189937866) | |
| 200-594, gnl|rheMac2|chr1 (160634497-160633549) | |
| 200-594, gnl|rn3|chr13 (109220967-109220139) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 42-197, gnl|bosTau2|chr16 (50787642-50787806) | |
| 42-197, gnl|canFam2|chr7 (11378560-11378991) | |
| 42-197, gnl|dasNov1|scaffold_117653 (5020-4591) | |
| 42-197, gnl|hg17|chr1 (206317842-206318262) | |
| 42-197, gnl|Hg17|chr1 (206317860-206318044) | |
| 42-197, gnl|loxAfr1|scaffold_27281 (17821-18262) | |
| 42-197, gnl|mm7|chr1 (192754108-192753723) | |
| 42-197, gnl|Mm7|chr1 (192754091-192753918) | |
| 42-197, gnl|monDom2|scaffold_13 (12756721-12757190) | |
| 42-197, gnl|oryCun1|scaffold_209827 (204533-204952) | |
| 42-197, gnl|panTro1|chr1 (189933372-189933792) | |
| 42-197, gnl|rheMac2|chr1 (160638603-160638178) | |
| 42-197, gnl|rn3|chr13 (109223499-109223137) | |
| 200-594, gnl|bosTau2|chr16 (50791533-50791934) | |
| 200-594, gnl|canFam2|chr7 (11382306-11383209) | |
| 200-594, gnl|dasNov1|scaffold_117653 (1533-636) | |
| 200-594, gnl|echTel1|scaffold_285621 (43138-42317) | |
| 200-594, gnl|hg17|chr1 (206321347-206322296) | |
| 200-594, gnl|Hg17|chr1 (206321720-206322119) | |
| 200-594, gnl|loxAfr1|scaffold_27281 (21233-22112) | |
| 200-594, gnl|mm7|chr1 (192751002-192750134) | |
| 200-594, gnl|Mm7|chr1 (192750698-192750302) | |
| 200-594, gnl|monDom2|scaffold_13 (12761048-12761966) | |
| 200-594, gnl|oryCun1|scaffold_209827 (207987-208850) | |
| 200-594, gnl|panTro1|chr1 (189936917-189937866) | |
| 200-594, gnl|rheMac2|chr1 (160634497-160633549) | |
| 200-594, gnl|rn3|chr13 (109220967-109220139) |