Non-Coding RNA Search

Thy1-THY010117H06

Sequence:


               
               TGGGAGTACATTCACTCGGGGAAGGAGAGGAAGAGCTTTTTTGAATATTTTTCTGGGAGT
TGAAGTTGTTCGGAATCGCTGCTTCTCTTTTCGGCTATCCGTGAGTCTCTGGGTGTAGAG
GGCTGCCTCAGTCTTTCAGGCCTGGAGAAGTAATCGACGCCGCGCACGCACCTTTCTGCC
CCGGACCCAGACGGCCTCAGCATCAGAACCCGAAAAGGAAGCTAAGCACAGGGCAGGGTG
GCTGCCGCCGTCTCTCCGAGCCACCAGGAACTGACCATCCCAGCCCTCGTTCCATAGGCC
CACCCTTTGACCCATTTAGTATCTGGGCTGGTTTCAGGCCCTGGCCCGGGAGATTGACAC
GGATCTTTGAGCAGTTTCCTGCTTTACCATGCTCTCTTGTGATATTTGTGGTGAAACAGT
AACCTCAGAACCAGACATGAAGGCTCACCTAATTGTTCATATGGAAGATGATGTTATATG
TCCATTTTGCAAATTGTCAGGTGTGAGTTATGATCAAATGTGTTTTCATATTGAAACTGC
TCCCTTTGAGCCAAATGAGCTACAAAGAAACCTTGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGGAGTACATTCACTCGGGGAAGGAGAGGAAGAGCTTTTTTGAATATTTTTCTGGGAGT
TGAAGTTGTTCGGAATCGCTGCTTCTCTTTTCGGCTATCCGTGAGTCTCTGGGTGTAGAG
GGCTGCCTCAGTCTTTCAGGCCTGGAGAAGTAATCGACGCCGCGCACGCACCTTTCTGCC
CCGGACCCAGACGGCCTCAGCATCAGAACCCGAAAAGGAAGCTAAGCACAGGGCAGGGTG
GCTGCCGCCGTCTCTCCGAGCCACCAGGAACTGACCATCCCAGCCCTCGTTCCATAGGCC
CACCCTTTGACCCATTTAGTATCTGGGCTGGTTTCAGGCCCTGGCCCGGGAGATTGACAC
GGATCTTTGAGCAGTTTCCTGCTTTACCATGCTCTCTTGTGATATTTGTGGTGAAACAGT
AACCTCAGAACCAGACATGAAGGCTCACCTAATTGTTCATATGGAAGATGATGTTATATG
TCCATTTTGCAAATTGTCAGGTGTGAGTTATGATCAAATGTGTTTTCATATTGAAACTGC
TCCCTTTGAGCCAAATGAGCTACAAAGAAACCTTGAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|12848894|dbj|BAB28126.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|12848894|dbj|BAB28126.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               237-382, - strand, RNAz p=0.870176

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               237-382, - strand, RNAz p=0.870176

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-382, gnl|bosTau2|chr9 (17040941-17040555)
               

               
               1-382, gnl|Hg17|chr6 (117096662-117096305)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-382, gnl|bosTau2|chr9 (17040941-17040555)
               

               
               1-382, gnl|Hg17|chr6 (117096662-117096305)

	1-382, gnl\|bosTau2\|chr9 (17040941-17040555)
	1-382, gnl\|Hg17\|chr6 (117096662-117096305)