Non-Coding RNA Search

Thy1-THY010119G04

Sequence:


               
               TACATGGATGTATCAGAGGAGAGAAGACTCAGAAATATACTTGGCTCAGTGCCTGGTGAG
GGGCAGACTGGGGACGGGATGGTTGATCGTGGAGATGGTGCTGACGATGGTGGCTGCCTG
TTCCCTGGGGCGCAGACCTCCCAGCTCCCAGGGCCTGATTCTGGGGCCACCCGCTGTATT
CCGGGCCAGCTGAGCACCGGGTGATGGAAGCGGGTGAGGGGAAGCCGGCAGCCCTGTCAG
AGCTGGATCTGAGGGAAGCAGGTCTGATTAAAGGAAGATAAACTCCTCTCTCCACTGTGT
CTTGCGGGGAGAGCTAAGCAATCAATAGGTCTCGCAGATCAGTGGAGGGGACTTGGAATC
TGGCAGCACGGGGCTTTTTAATTAAACCTCTAACTGTGAGAAAAGGTAACGGCCTTATTT
CTGCAGCCAGCATTTCTGTCTGCCTGCCAGAAACTGAACAAGTCAATGTACTTTGGGAGG
TTCAGAGGCTCGTGATGAGGTGGCCCCTGGTTGCAGGAGGGTCTGACCCCGCCAGGATGA
GCCTCTGGATGGCCAGGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACATGGATGTATCAGAGGAGAGAAGACTCAGAAATATACTTGGCTCAGTGCCTGGTGAG
GGGCAGACTGGGGACGGGATGGTTGATCGTGGAGATGGTGCTGACGATGGTGGCTGCCTG
TTCCCTGGGGCGCAGACCTCCCAGCTCCCAGGGCCTGATTCTGGGGCCACCCGCTGTATT
CCGGGCCAGCTGAGCACCGGGTGATGGAAGCGGGTGAGGGGAAGCCGGCAGCCCTGTCAG
AGCTGGATCTGAGGGAAGCAGGTCTGATTAAAGGAAGATAAACTCCTCTCTCCACTGTGT
CTTGCGGGGAGAGCTAAGCAATCAATAGGTCTCGCAGATCAGTGGAGGGGACTTGGAATC
TGGCAGCACGGGGCTTTTTAATTAAACCTCTAACTGTGAGAAAAGGTAACGGCCTTATTT
CTGCAGCCAGCATTTCTGTCTGCCTGCCAGAAACTGAACAAGTCAATGTACTTTGGGAGG
TTCAGAGGCTCGTGATGAGGTGGCCCCTGGTTGCAGGAGGGTCTGACCCCGCCAGGATGA
GCCTCTGGATGGCCAGGGT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               209-406, - strand, RNAz p=0.948337

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               209-406, - strand, RNAz p=0.948337

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-559, gnl|bosTau2|chr25 (11851341-11851879)
               

               
               1-559, gnl|Hg17|chr16 (16608611-16609168)
               

               
               1-559, gnl|Mm7|chr7 (114013140-114012561)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-559, gnl|bosTau2|chr25 (11851341-11851879)
               

               
               1-559, gnl|Hg17|chr16 (16608611-16609168)
               

               
               1-559, gnl|Mm7|chr7 (114013140-114012561)

	1-559, gnl\|bosTau2\|chr25 (11851341-11851879)
	1-559, gnl\|Hg17\|chr16 (16608611-16609168)
	1-559, gnl\|Mm7\|chr7 (114013140-114012561)