Non-Coding RNA Search

Thy1-THY010201G02

Sequence:


               
               ACACTGCTCCCTGCCTCCCCAAACCTGAAGTTCAAAATTAAACTTGGCTTCCAGTCACCC
ACTCACATGGCTGACTCCATCATAAATGGCTGTTTCCCCTCCAGGTGACCTCATTGCTAC
TGTCCCCCTTCCTACTCTGCAAATGCTCTCTACTGACTGAAGGCATTGTCTCCCTGTCAG
TGGTCATGTCTCCTTTCTCTAGAAGCCACTACACTGAAGCATTATGGCCAAAGTAATAGA
ACACAGGTCCAGAACAATTAAATGCAACTGGCTATACAGAAAGGCTGAATTTGCATCTAA
AGCAGAAAGTCACTAGCAGCCATTGCTTCCCCCGGGCTACATTATCCCTGAGGGCACCTG
CTGTGATTATGTAATGAAGCCTTTAGTAAACTCAGAAGGTGACAGGTGGAAAGTCCTTGG
AAACTTGGAAAGACCAAAGATGCACAGGACAAGAGCTGTGAGTATATGCAAAATATATAC
CAGTGCCTTGAGAATGAAACAGTGTTTCAGGCAGTGGAGACATTGTGGAAAATCATCCTA
TGCCATCGAAACTTCCCCAGTCCTTAAGAGTTCAAGATGACATATCCAAAGGGAACGAAC
ACTAGCTTCAGCACAGAAACTGAGCTACATCACTTTGCCTAAACTTTTTGTCTGAGGAAC
TCCATGCTCAGTGGACTGCATTTCTCAGCCCTTTCCATGTAATAATCTCCTGGCCCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACACTGCTCCCTGCCTCCCCAAACCTGAAGTTCAAAATTAAACTTGGCTTCCAGTCACCC
ACTCACATGGCTGACTCCATCATAAATGGCTGTTTCCCCTCCAGGTGACCTCATTGCTAC
TGTCCCCCTTCCTACTCTGCAAATGCTCTCTACTGACTGAAGGCATTGTCTCCCTGTCAG
TGGTCATGTCTCCTTTCTCTAGAAGCCACTACACTGAAGCATTATGGCCAAAGTAATAGA
ACACAGGTCCAGAACAATTAAATGCAACTGGCTATACAGAAAGGCTGAATTTGCATCTAA
AGCAGAAAGTCACTAGCAGCCATTGCTTCCCCCGGGCTACATTATCCCTGAGGGCACCTG
CTGTGATTATGTAATGAAGCCTTTAGTAAACTCAGAAGGTGACAGGTGGAAAGTCCTTGG
AAACTTGGAAAGACCAAAGATGCACAGGACAAGAGCTGTGAGTATATGCAAAATATATAC
CAGTGCCTTGAGAATGAAACAGTGTTTCAGGCAGTGGAGACATTGTGGAAAATCATCCTA
TGCCATCGAAACTTCCCCAGTCCTTAAGAGTTCAAGATGACATATCCAAAGGGAACGAAC
ACTAGCTTCAGCACAGAAACTGAGCTACATCACTTTGCCTAAACTTTTTGTCTGAGGAAC
TCCATGCTCAGTGGACTGCATTTCTCAGCCCTTTCCATGTAATAATCTCCTGGCCCCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               399-527, + strand, RNAz p=0.998962

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               399-527, + strand, RNAz p=0.998962

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               1-246, gnl|bosTau2|chr8 (30935872-30936117)
               

               
               1-246, gnl|Hg17|chr8 (22523803-22523294)
               


               
               247-667, gnl|bosTau2|chr8 (30936139-30936553)
               

               
               247-667, gnl|Hg17|chr8 (22523272-22522790)
               

               
               247-667, gnl|Mm7|chr14 (64793392-64793739)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-246, gnl|bosTau2|chr8 (30935872-30936117)
               

               
               1-246, gnl|Hg17|chr8 (22523803-22523294)
               


               
               247-667, gnl|bosTau2|chr8 (30936139-30936553)
               

               
               247-667, gnl|Hg17|chr8 (22523272-22522790)
               

               
               247-667, gnl|Mm7|chr14 (64793392-64793739)

	1-246, gnl\|bosTau2\|chr8 (30935872-30936117)
	1-246, gnl\|Hg17\|chr8 (22523803-22523294)

	247-667, gnl\|bosTau2\|chr8 (30936139-30936553)
	247-667, gnl\|Hg17\|chr8 (22523272-22522790)
	247-667, gnl\|Mm7\|chr14 (64793392-64793739)