Non-Coding RNA Search

Thy1-THY010203C07

Sequence:


               
               GGATAAACCCTTGCGGCTGGGTCTCTGGGCTTGGCTTCGGTGCCACGGTGTCTGACTCCA
CGCGGGGGTCTCGGAAGTGGTCTCGTGCCCCGCGGTTCCTGCTTCAGCGCGGCGACCGTC
GCCACGGTGGCGGCCACTGTACCTCGTCCCAGTTCCGCGGCATCAGCGGGCCCTGAGCAT
ATGTCGGGCCAGGGCCAGACGGCGTCCGCGTCGTCGGCGTGGAGCTCGATATTCCGCCAC
GTCCGGTACGAGAATCTGGTAGCGGGCGTGAGTGGTGGGGTCCTTTCCAACCTCGCGCTG
CACCCACTCGACCTTGTGAAGATCTGCTTTGCCGGTAAGAGACAGCTTAGACTCTGAGCT
TCTCTTTGCTGTCACCCCGAATGAGTGGTAAAGACGCAGAATGAGACCTTGCCCTCCCCT
GCCTCTTACGTACTACAGGCGAGGCAGGCGTTGAAGAAGATGCTTCTGTCCGGGCCCACC
GGGAGCCACATTTGAGGAAGGGAAGTCTGGTAAAGGGGTTTGACCGCCGTCATCCCCTTT
CCTCAACACTAAGGAATGAGGAGTATGGGCATAAAAGCCTGAGAAAAGTCCTCACTGGAG
TATAACGTGGGCCAAATTTATGAAATAAGAGAAAGTTCATCCTATTTTAGGGCTTAACCC
TCGCATTCACCCTTGAAGGTACAGGTGTCCCCCGCTTTTCGAAAGTTCGCTTTACACTAT
CTCGCTTTTAGGAAAGGCTTACATGAGTACCTGTGTTCCGCTAATTCAAAAATCCGAAAG
AAACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGATAAACCCTTGCGGCTGGGTCTCTGGGCTTGGCTTCGGTGCCACGGTGTCTGACTCCA
CGCGGGGGTCTCGGAAGTGGTCTCGTGCCCCGCGGTTCCTGCTTCAGCGCGGCGACCGTC
GCCACGGTGGCGGCCACTGTACCTCGTCCCAGTTCCGCGGCATCAGCGGGCCCTGAGCAT
ATGTCGGGCCAGGGCCAGACGGCGTCCGCGTCGTCGGCGTGGAGCTCGATATTCCGCCAC
GTCCGGTACGAGAATCTGGTAGCGGGCGTGAGTGGTGGGGTCCTTTCCAACCTCGCGCTG
CACCCACTCGACCTTGTGAAGATCTGCTTTGCCGGTAAGAGACAGCTTAGACTCTGAGCT
TCTCTTTGCTGTCACCCCGAATGAGTGGTAAAGACGCAGAATGAGACCTTGCCCTCCCCT
GCCTCTTACGTACTACAGGCGAGGCAGGCGTTGAAGAAGATGCTTCTGTCCGGGCCCACC
GGGAGCCACATTTGAGGAAGGGAAGTCTGGTAAAGGGGTTTGACCGCCGTCATCCCCTTT
CCTCAACACTAAGGAATGAGGAGTATGGGCATAAAAGCCTGAGAAAAGTCCTCACTGGAG
TATAACGTGGGCCAAATTTATGAAATAAGAGAAAGTTCATCCTATTTTAGGGCTTAACCC
TCGCATTCACCCTTGAAGGTACAGGTGTCCCCCGCTTTTCGAAAGTTCGCTTTACACTAT
CTCGCTTTTAGGAAAGGCTTACATGAGTACCTGTGTTCCGCTAATTCAAAAATCCGAAAG
AAACC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               124-240, - strand, RNAz p=0.584997

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               124-240, - strand, RNAz p=0.584997

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               7-245, gnl|bosTau2|chrX (43641757-43641516)
               

               
               7-245, gnl|Hg17|chr8 (104496511-104496277)
               

               
               7-245, gnl|Mm7|chr15 (39118114-39117888)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-245, gnl|bosTau2|chrX (43641757-43641516)
               

               
               7-245, gnl|Hg17|chr8 (104496511-104496277)
               

               
               7-245, gnl|Mm7|chr15 (39118114-39117888)

	7-245, gnl\|bosTau2\|chrX (43641757-43641516)
	7-245, gnl\|Hg17\|chr8 (104496511-104496277)
	7-245, gnl\|Mm7\|chr15 (39118114-39117888)