Non-Coding RNA Search

Thy1-THY010203F07

Sequence:


               
               ATGCAGCTTCTGTGAGGAAAACAGACTAGCTACCGTTGGTCTGGTTGCTGGGGACGAGCG
GCCCGGAGGGAGTCGAGGAGACTCCTCGCTCCCCAACCCACAGACTTACTACCCCTGCCA
GTGCCTCCGGAGACCCGGACCCTTCCCAGTGCCCGAAGCTCCGTGAGGAAACCGAGGCGT
CACAGGTGATGGCGGAGACGGGCGAGGAGAGCTTGGCGCCCGTCACGCAGCCACAGCTCC
AGCTTCCAGAGGAGCGGGGCGCACCCCAGGCTGCTCCCCCAGATCCGAGCTGTGCCCGTG
CTACCCAGCCCCGAGGCGGTGGGGACTGCGGAGCCGGGCAGGAGCAAGCTCCGCCCCCCG
CGGAGGCCTTGGAAACCGCGTCCAAGGCTCTGGCAACGGGCGGCAGCCTGGGAAATGGCG
GTCGCCGGGGAGAGCTGCACGGTCCTGAGGGGAAGAAAGCCATGGAAGCAGGAGGCGCGG
AGAAGTTGGGGTCCGAGGCGATGGCAGAGGCGAAGGCTGAGGACGTGAAGACCGAAGAGG
GCCCCGCCTCCTCAGTCCCAGTGCTGGAGGAGGTGGCGGGGAAGGAAGGAGCCCAGGCGG
TGGAGGCAGTGGACCAGCAGATGGAGGTGGAGGAACAGCCAGTGGGTGAAGAAATAGAAA
TGGTGGAGAATAGGGTGGTGGTAGAGGAGGAGAGGGCGCGAGCCGGTTACCGGCCCCCTT
CGTCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGCAGCTTCTGTGAGGAAAACAGACTAGCTACCGTTGGTCTGGTTGCTGGGGACGAGCG
GCCCGGAGGGAGTCGAGGAGACTCCTCGCTCCCCAACCCACAGACTTACTACCCCTGCCA
GTGCCTCCGGAGACCCGGACCCTTCCCAGTGCCCGAAGCTCCGTGAGGAAACCGAGGCGT
CACAGGTGATGGCGGAGACGGGCGAGGAGAGCTTGGCGCCCGTCACGCAGCCACAGCTCC
AGCTTCCAGAGGAGCGGGGCGCACCCCAGGCTGCTCCCCCAGATCCGAGCTGTGCCCGTG
CTACCCAGCCCCGAGGCGGTGGGGACTGCGGAGCCGGGCAGGAGCAAGCTCCGCCCCCCG
CGGAGGCCTTGGAAACCGCGTCCAAGGCTCTGGCAACGGGCGGCAGCCTGGGAAATGGCG
GTCGCCGGGGAGAGCTGCACGGTCCTGAGGGGAAGAAAGCCATGGAAGCAGGAGGCGCGG
AGAAGTTGGGGTCCGAGGCGATGGCAGAGGCGAAGGCTGAGGACGTGAAGACCGAAGAGG
GCCCCGCCTCCTCAGTCCCAGTGCTGGAGGAGGTGGCGGGGAAGGAAGGAGCCCAGGCGG
TGGAGGCAGTGGACCAGCAGATGGAGGTGGAGGAACAGCCAGTGGGTGAAGAAATAGAAA
TGGTGGAGAATAGGGTGGTGGTAGAGGAGGAGAGGGCGCGAGCCGGTTACCGGCCCCCTT
CGTCTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               536-643, + strand, RNAz p=0.567493

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               536-643, + strand, RNAz p=0.567493

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               3-690, gnl|bosTau2|chr5 (62726747-62727442)
               

               
               3-690, gnl|Hg17|chr6 (116707740-116707032)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-690, gnl|bosTau2|chr5 (62726747-62727442)
               

               
               3-690, gnl|Hg17|chr6 (116707740-116707032)

	3-690, gnl\|bosTau2\|chr5 (62726747-62727442)
	3-690, gnl\|Hg17\|chr6 (116707740-116707032)