Non-Coding RNA Search

Thy1-THY010204C10

Sequence:


               
               ATACACTGAGTTGTCAAAATAGTAGACTTTTCTGGTTGTGGGTGAGAATTTAAGCCAAAA
TAGAATGCAGTATTCCCCCGAAAGTAACTTTGGATCTTTGCCTTAAGACCTGAGGCAAAA
GTTACATGATTTAGATAACTAGGTTAGAACTAAGATATTGGGCCTCTGCCTAGAAAACCA
GTTAGAGGACTTTAATCTTGATATAGCAAGGAATAGAGAGGGATTATAGCCTCTTGAAAC
AAAGTAATGAAAATTTACAAAATAATGGAATTTTTGAAAATTAAATGTGGCTATACTATG
TATAGAAGGATTCTAAGAAAATCTGTTGACAAGGAAACTGGGCATGTGATTATTATAATC
TTGGAATGATGAAAACCTGAACAGGATGGTGACAATGAGAATGGAAATGAGAGAATAAAT
TTAAGATATTTCAAAGGAAAAAATTGTGGAGCATCATGATGAGTTGGATAAAAGGGAAGT
GTCAAAAATTACACATTTTCTATGCTAGTAAACAATGATAGTATCACTGAAAGGGGACAG
TTAAGAGAAGCTAGTTTAAGAAGAAAAAATGTTGAGTCCCATCCTTGTAATAATGAATTT
AAGATATCCAGggagttccctagtggctcatcggcttacgaacccaaataatatccatga
ggatgcaggtttgatccctggcctcttagttaaaggatttggcattgccatgagctggta
ttgccggttcagttcccacattgctgtggctgtggcataggccagcatcttcagctccaa
ttccacccctaccctgggaacttccacatgctgcaggtgcagccctgaaaagCAAAAAAA
AAAGAAAAAGTCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATACACTGAGTTGTCAAAATAGTAGACTTTTCTGGTTGTGGGTGAGAATTTAAGCCAAAA
TAGAATGCAGTATTCCCCCGAAAGTAACTTTGGATCTTTGCCTTAAGACCTGAGGCAAAA
GTTACATGATTTAGATAACTAGGTTAGAACTAAGATATTGGGCCTCTGCCTAGAAAACCA
GTTAGAGGACTTTAATCTTGATATAGCAAGGAATAGAGAGGGATTATAGCCTCTTGAAAC
AAAGTAATGAAAATTTACAAAATAATGGAATTTTTGAAAATTAAATGTGGCTATACTATG
TATAGAAGGATTCTAAGAAAATCTGTTGACAAGGAAACTGGGCATGTGATTATTATAATC
TTGGAATGATGAAAACCTGAACAGGATGGTGACAATGAGAATGGAAATGAGAGAATAAAT
TTAAGATATTTCAAAGGAAAAAATTGTGGAGCATCATGATGAGTTGGATAAAAGGGAAGT
GTCAAAAATTACACATTTTCTATGCTAGTAAACAATGATAGTATCACTGAAAGGGGACAG
TTAAGAGAAGCTAGTTTAAGAAGAAAAAATGTTGAGTCCCATCCTTGTAATAATGAATTT
AAGATATCCAGggagttccctagtggctcatcggcttacgaacccaaataatatccatga
ggatgcaggtttgatccctggcctcttagttaaaggatttggcattgccatgagctggta
ttgccggttcagttcccacattgctgtggctgtggcataggccagcatcttcagctccaa
ttccacccctaccctgggaacttccacatgctgcaggtgcagccctgaaaagCAAAAAAA
AAAGAAAAAGTCAT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               46-319, + strand, RNAz p=0.981835

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               46-319, + strand, RNAz p=0.981835

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               7-612, gnl|bosTau2|chr12 (8321039-8320426)
               

               
               7-612, gnl|Hg17|chr13 (49499235-49498350)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-612, gnl|bosTau2|chr12 (8321039-8320426)
               

               
               7-612, gnl|Hg17|chr13 (49499235-49498350)

	7-612, gnl\|bosTau2\|chr12 (8321039-8320426)
	7-612, gnl\|Hg17\|chr13 (49499235-49498350)