Non-Coding RNA Search

Thy1-THY010206H02

Sequence:


               
               ATTGCGCCTGCGCGGCCGGCGGCTGACAGGCAGTTCCGGCTGGGGCCTCCCTCGGTCTCT
CTCCGCTCGGCTGCTTCCTCCCAGCCCGGCGTTCCCGGCCCGGCCGGCACGACTCTCGAG
CCTCAGCACCCAGGCCAGGCCATGGCCGCCGGCGGGCTGGGGAGACTGTGGCGCCATGCC
TAGGGCTTTATGCGCCTCCGGCTCTCTCTCCCTGCACCAGCCCTAAGTCGTTGGCCCCCT
CCCTCCGCTTCCAGCAGTGGTCTTTCGGGTCGGCTTGGCGCTGTCGCAGACCCCGACCAG
CCCCTTCCAGTCCCGACGAACACCGTCGTCATGTCCCAGCCCGGGATACCGGCCTCCGGC
GCCGCCCCCACGGGCCTCCAGGCCCAGAACGGGGCCGCCCCAGCCTCGGGGTCTCATTAC
AGCAACGGTCCTGTCCAAAATGCACTGATGTCTTCACAAGTATCGGTGAGCCAAGGATAT
AATTCCCAGCTTCCAGGATCCTACCCTCATCTAATACCAGCAAAGACTTTGAATCCAGTC
CCTGAACAGTCTAACTCTGGTGGTTCCCAGACTCTTTCTCCATTAAGCAGTTATCAGGGA
CCTGGACAGACTCTTTATAGACCACCTGTGGCTTCTAATCCAGTGACACCTTCGCTCCAT
AGTGGTTCTGTTTCCCGATTGCCACCACCTACTTCTCAGAACCCAGCTGCTACACCAATG
CCTTCTGGGAGCTTTCCTCCTGGAGCCAACATACCACCACCTTTGAATTGGCAGTATAAC
TATTCACCACAGACAAACCATTATCCTCGTGCATCATCCCAGCCAGCTATGTCGGGGAAT
ACAAATTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTGCGCCTGCGCGGCCGGCGGCTGACAGGCAGTTCCGGCTGGGGCCTCCCTCGGTCTCT
CTCCGCTCGGCTGCTTCCTCCCAGCCCGGCGTTCCCGGCCCGGCCGGCACGACTCTCGAG
CCTCAGCACCCAGGCCAGGCCATGGCCGCCGGCGGGCTGGGGAGACTGTGGCGCCATGCC
TAGGGCTTTATGCGCCTCCGGCTCTCTCTCCCTGCACCAGCCCTAAGTCGTTGGCCCCCT
CCCTCCGCTTCCAGCAGTGGTCTTTCGGGTCGGCTTGGCGCTGTCGCAGACCCCGACCAG
CCCCTTCCAGTCCCGACGAACACCGTCGTCATGTCCCAGCCCGGGATACCGGCCTCCGGC
GCCGCCCCCACGGGCCTCCAGGCCCAGAACGGGGCCGCCCCAGCCTCGGGGTCTCATTAC
AGCAACGGTCCTGTCCAAAATGCACTGATGTCTTCACAAGTATCGGTGAGCCAAGGATAT
AATTCCCAGCTTCCAGGATCCTACCCTCATCTAATACCAGCAAAGACTTTGAATCCAGTC
CCTGAACAGTCTAACTCTGGTGGTTCCCAGACTCTTTCTCCATTAAGCAGTTATCAGGGA
CCTGGACAGACTCTTTATAGACCACCTGTGGCTTCTAATCCAGTGACACCTTCGCTCCAT
AGTGGTTCTGTTTCCCGATTGCCACCACCTACTTCTCAGAACCCAGCTGCTACACCAATG
CCTTCTGGGAGCTTTCCTCCTGGAGCCAACATACCACCACCTTTGAATTGGCAGTATAAC
TATTCACCACAGACAAACCATTATCCTCGTGCATCATCCCAGCCAGCTATGTCGGGGAAT
ACAAATTT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61831864|ref|XP_598702.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61831864|ref|XP_598702.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               484-763, - strand, RNAz p=0.984428

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               484-763, - strand, RNAz p=0.984428

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               324-848, gnl|bosTau2|chr4 (3295172-3294648)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               324-848, gnl|bosTau2|chr4 (3295172-3294648)